Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.94□□□□□ -0.34
CCL2P13500 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL2P13500 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.94□□□□□ -0.34
CCL2P13500 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL2P13500 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.94□□□□□ -0.34
CCL2P13500 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CCL2P13500 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CCL2P13500 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL2P13500 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL2P13500 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CCL2P13500 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CCL2P13500 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CCL2P13500 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 AC023908.3-201ENST00000564211 3047 ntBASIC12.93□□□□□ -0.34
CCL2P13500 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
CCL2P13500 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.93□□□□□ -0.34
CCL2P13500 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL2P13500 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CCL2P13500 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL2P13500 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.93□□□□□ -0.34
CCL2P13500 RN7SKP175-201ENST00000408472 289 ntBASIC12.93□□□□□ -0.34
CCL2P13500 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CCL2P13500 CD8B2-202ENST00000417670 633 ntBASIC12.93□□□□□ -0.34
CCL2P13500 TLE1P1-201ENST00000422965 589 ntBASIC12.93□□□□□ -0.34
CCL2P13500 BNIP3P42-201ENST00000454982 569 ntBASIC12.93□□□□□ -0.34
CCL2P13500 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CCL2P13500 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CCL2P13500 AP005482.1-201ENST00000563722 1273 ntBASIC12.93□□□□□ -0.34
CCL2P13500 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.93□□□□□ -0.34
CCL2P13500 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.93□□□□□ -0.34
CCL2P13500 BNIP3P29-201ENST00000598302 571 ntBASIC12.93□□□□□ -0.34
CCL2P13500 AC073413.1-201ENST00000603927 732 ntBASIC12.93□□□□□ -0.34
CCL2P13500 AC011447.5-201ENST00000616168 564 ntBASIC12.93□□□□□ -0.34
CCL2P13500 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL2P13500 AC113367.3-201ENST00000508316 1912 ntBASIC12.93□□□□□ -0.34
CCL2P13500 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
CCL2P13500 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL2P13500 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL2P13500 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL2P13500 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL2P13500 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL2P13500 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CCL2P13500 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 SNX18-202ENST00000343017 3140 ntBASIC12.92□□□□□ -0.34
CCL2P13500 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
CCL2P13500 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL2P13500 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CCL2P13500 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CCL2P13500 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CCL2P13500 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.92□□□□□ -0.34
CCL2P13500 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCL2P13500 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms