Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.83□□□□□ -0.2
CCL4P13236 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL4P13236 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL4P13236 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL4P13236 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.83□□□□□ -0.2
CCL4P13236 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.83□□□□□ -0.2
CCL4P13236 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL4P13236 RN7SL530P-201ENST00000485097 298 ntBASIC13.83□□□□□ -0.2
CCL4P13236 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.83□□□□□ -0.2
CCL4P13236 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CCL4P13236 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CCL4P13236 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.83□□□□□ -0.2
CCL4P13236 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.83□□□□□ -0.2
CCL4P13236 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL4P13236 AL109954.1-202ENST00000564051 2148 ntBASIC13.83□□□□□ -0.2
CCL4P13236 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
CCL4P13236 RPL17P45-201ENST00000586289 509 ntBASIC13.83□□□□□ -0.2
CCL4P13236 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CCL4P13236 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL4P13236 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL4P13236 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL4P13236 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CCL4P13236 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL4P13236 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.83□□□□□ -0.2
CCL4P13236 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
CCL4P13236 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL4P13236 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL4P13236 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CCL4P13236 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL4P13236 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL4P13236 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL4P13236 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCL4P13236 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.82□□□□□ -0.2
CCL4P13236 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CCL4P13236 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 KRT8P31-201ENST00000504812 1408 ntBASIC13.82□□□□□ -0.2
CCL4P13236 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.82□□□□□ -0.2
CCL4P13236 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
CCL4P13236 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CCL4P13236 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCL4P13236 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CCL4P13236 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCL4P13236 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCL4P13236 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL4P13236 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL4P13236 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL4P13236 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 AC114947.1-202ENST00000514136 344 ntBASIC13.82□□□□□ -0.2
CCL4P13236 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.82□□□□□ -0.2
CCL4P13236 DNM1P30-201ENST00000563586 452 ntBASIC13.82□□□□□ -0.2
CCL4P13236 AC124068.2-201ENST00000569473 1109 ntBASIC13.82□□□□□ -0.2
CCL4P13236 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL4P13236 AL022334.2-201ENST00000610000 484 ntBASIC13.82□□□□□ -0.2
CCL4P13236 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CCL4P13236 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL4P13236 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCL4P13236 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CCL4P13236 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL4P13236 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CCL4P13236 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL4P13236 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL4P13236 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL4P13236 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCL4P13236 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL4P13236 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL4P13236 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL4P13236 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CCL4P13236 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL4P13236 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms