Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 GCOM2-201ENST00000509133 1104 ntBASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 AC140912.1-201ENST00000577171 1054 ntBASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 WFDC1-204ENST00000613603 549 ntBASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 AC015688.4-201ENST00000580780 1647 ntBASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HNRNPCL4P0DMR1 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 RN7SKP230-201ENST00000365642 335 ntBASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 PIN1P1-201ENST00000412108 996 ntBASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 AC245100.3-201ENST00000441281 285 ntBASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 MESTP3-201ENST00000503460 968 ntBASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 AC027796.2-201ENST00000575326 344 ntBASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 AL033527.5-201ENST00000641382 801 ntBASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 RN7SL832P-201ENST00000607781 1756 ntBASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 INE2-201ENST00000630399 1874 ntBASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.78□□□□□ -0.2
HNRNPCL4P0DMR1 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HNRNPCL4P0DMR1 AC041040.2-201ENST00000622926 2899 ntBASIC13.77□□□□□ -0.2
HNRNPCL4P0DMR1 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
HNRNPCL4P0DMR1 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
HNRNPCL4P0DMR1 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HNRNPCL4P0DMR1 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
HNRNPCL4P0DMR1 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HNRNPCL4P0DMR1 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HNRNPCL4P0DMR1 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HNRNPCL4P0DMR1 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HNRNPCL4P0DMR1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HNRNPCL4P0DMR1 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HNRNPCL4P0DMR1 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms