Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.77■□□□□ 0.12
FAM228BP0C875 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.77■□□□□ 0.12
FAM228BP0C875 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.77■□□□□ 0.12
FAM228BP0C875 LINC02560-201ENST00000596379 459 ntBASIC15.77■□□□□ 0.12
FAM228BP0C875 BX088702.1-201ENST00000610784 235 ntBASIC15.77■□□□□ 0.12
FAM228BP0C875 AC145423.3-201ENST00000615987 467 ntBASIC15.77■□□□□ 0.12
FAM228BP0C875 AC138466.3-201ENST00000619983 221 ntBASIC15.77■□□□□ 0.12
FAM228BP0C875 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.77■□□□□ 0.12
FAM228BP0C875 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FAM228BP0C875 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
FAM228BP0C875 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FAM228BP0C875 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FAM228BP0C875 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.77■□□□□ 0.11
FAM228BP0C875 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
FAM228BP0C875 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FAM228BP0C875 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.77■□□□□ 0.11
FAM228BP0C875 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.77■□□□□ 0.11
FAM228BP0C875 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
FAM228BP0C875 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FAM228BP0C875 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FAM228BP0C875 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.76■□□□□ 0.11
FAM228BP0C875 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
FAM228BP0C875 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FAM228BP0C875 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
FAM228BP0C875 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FAM228BP0C875 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.76■□□□□ 0.11
FAM228BP0C875 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.76■□□□□ 0.11
FAM228BP0C875 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.76■□□□□ 0.11
FAM228BP0C875 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FAM228BP0C875 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
FAM228BP0C875 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FAM228BP0C875 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.76■□□□□ 0.11
FAM228BP0C875 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FAM228BP0C875 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FAM228BP0C875 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FAM228BP0C875 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
FAM228BP0C875 MIR770-201ENST00000390219 98 ntBASIC15.76■□□□□ 0.11
FAM228BP0C875 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
FAM228BP0C875 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.76■□□□□ 0.11
FAM228BP0C875 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.76■□□□□ 0.11
FAM228BP0C875 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
FAM228BP0C875 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.76■□□□□ 0.11
FAM228BP0C875 AC009486.1-201ENST00000569860 813 ntBASIC15.76■□□□□ 0.11
FAM228BP0C875 RN7SL204P-201ENST00000582831 262 ntBASIC15.76■□□□□ 0.11
FAM228BP0C875 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.76■□□□□ 0.11
FAM228BP0C875 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.76■□□□□ 0.11
FAM228BP0C875 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.76■□□□□ 0.11
FAM228BP0C875 RPSAP52-203ENST00000622976 1023 ntBASIC15.76■□□□□ 0.11
FAM228BP0C875 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.76■□□□□ 0.11
FAM228BP0C875 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FAM228BP0C875 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
FAM228BP0C875 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
FAM228BP0C875 AC090643.2-201ENST00000623442 2029 ntBASIC15.76■□□□□ 0.11
FAM228BP0C875 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.76■□□□□ 0.11
FAM228BP0C875 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FAM228BP0C875 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
FAM228BP0C875 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
FAM228BP0C875 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
FAM228BP0C875 AC023794.5-201ENST00000564380 2157 ntBASIC15.76■□□□□ 0.11
FAM228BP0C875 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
FAM228BP0C875 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FAM228BP0C875 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FAM228BP0C875 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FAM228BP0C875 AC105206.1-202ENST00000314927 2368 ntBASIC15.76■□□□□ 0.11
FAM228BP0C875 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.76■□□□□ 0.11
FAM228BP0C875 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FAM228BP0C875 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
FAM228BP0C875 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.76■□□□□ 0.11
FAM228BP0C875 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FAM228BP0C875 AC009093.2-202ENST00000620513 2079 ntBASIC15.75■□□□□ 0.11
FAM228BP0C875 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FAM228BP0C875 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.75■□□□□ 0.11
FAM228BP0C875 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FAM228BP0C875 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.75■□□□□ 0.11
FAM228BP0C875 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FAM228BP0C875 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.75■□□□□ 0.11
FAM228BP0C875 AL590440.2-201ENST00000641973 1595 ntBASIC15.75■□□□□ 0.11
FAM228BP0C875 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FAM228BP0C875 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FAM228BP0C875 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.75■□□□□ 0.11
FAM228BP0C875 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FAM228BP0C875 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.75■□□□□ 0.11
FAM228BP0C875 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FAM228BP0C875 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FAM228BP0C875 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FAM228BP0C875 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
FAM228BP0C875 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FAM228BP0C875 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FAM228BP0C875 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
FAM228BP0C875 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FAM228BP0C875 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FAM228BP0C875 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.75■□□□□ 0.11
FAM228BP0C875 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.75■□□□□ 0.11
FAM228BP0C875 FAM207CP-201ENST00000443486 507 ntBASIC15.75■□□□□ 0.11
FAM228BP0C875 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.75■□□□□ 0.11
FAM228BP0C875 GPALPP1-207ENST00000611650 899 ntBASIC15.75■□□□□ 0.11
FAM228BP0C875 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.75■□□□□ 0.11
FAM228BP0C875 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FAM228BP0C875 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
FAM228BP0C875 AL138709.1-201ENST00000614840 1693 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms