Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINGO3P0C6S8 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINGO3P0C6S8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINGO3P0C6S8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.41□□□□□ -0.1
LINGO3P0C6S8 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.41□□□□□ -0.1
LINGO3P0C6S8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINGO3P0C6S8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.41□□□□□ -0.1
LINGO3P0C6S8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINGO3P0C6S8 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 TARDBPP1-201ENST00000442013 1203 ntBASIC14.4□□□□□ -0.1
LINGO3P0C6S8 AC009477.1-201ENST00000452936 217 ntBASIC14.4□□□□□ -0.1
LINGO3P0C6S8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 AC004890.2-204ENST00000481968 304 ntBASIC14.4□□□□□ -0.1
LINGO3P0C6S8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 AC025048.3-201ENST00000590609 569 ntBASIC14.4□□□□□ -0.1
LINGO3P0C6S8 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 AC005702.4-201ENST00000618393 416 ntBASIC14.4□□□□□ -0.1
LINGO3P0C6S8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 GOLGA2P5-201ENST00000266746 2395 ntBASIC14.4□□□□□ -0.1
LINGO3P0C6S8 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 AC018442.1-201ENST00000421439 2061 ntBASIC14.4□□□□□ -0.1
LINGO3P0C6S8 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LINGO3P0C6S8 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.11
LINGO3P0C6S8 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 BASP1P1-201ENST00000430708 665 ntBASIC14.39□□□□□ -0.11
LINGO3P0C6S8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 Z97205.2-201ENST00000564697 1639 ntBASIC14.39□□□□□ -0.11
LINGO3P0C6S8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.39□□□□□ -0.11
LINGO3P0C6S8 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms