Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.65■□□□□ 0.26
TPM3P06753 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.65■□□□□ 0.26
TPM3P06753 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.65■□□□□ 0.26
TPM3P06753 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
TPM3P06753 SDHAP3-202ENST00000515467 728 ntBASIC16.65■□□□□ 0.26
TPM3P06753 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.65■□□□□ 0.26
TPM3P06753 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.65■□□□□ 0.26
TPM3P06753 AC004461.2-201ENST00000629517 803 ntBASIC16.65■□□□□ 0.26
TPM3P06753 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TPM3P06753 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC16.65■□□□□ 0.26
TPM3P06753 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 AL157414.3-201ENST00000624276 1954 ntBASIC16.65■□□□□ 0.26
TPM3P06753 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC16.65■□□□□ 0.26
TPM3P06753 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TPM3P06753 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TPM3P06753 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TPM3P06753 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TPM3P06753 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TPM3P06753 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC16.64■□□□□ 0.25
TPM3P06753 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.64■□□□□ 0.25
TPM3P06753 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TPM3P06753 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TPM3P06753 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.64■□□□□ 0.25
TPM3P06753 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.64■□□□□ 0.25
TPM3P06753 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.64■□□□□ 0.25
TPM3P06753 PGAM5P1-201ENST00000518923 814 ntBASIC16.64■□□□□ 0.25
TPM3P06753 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.64■□□□□ 0.25
TPM3P06753 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.64■□□□□ 0.25
TPM3P06753 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.64■□□□□ 0.25
TPM3P06753 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 AP001059.3-201ENST00000619053 235 ntBASIC16.64■□□□□ 0.25
TPM3P06753 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.64■□□□□ 0.25
TPM3P06753 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
TPM3P06753 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.64■□□□□ 0.25
TPM3P06753 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.64■□□□□ 0.25
TPM3P06753 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.64■□□□□ 0.25
TPM3P06753 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.64■□□□□ 0.25
TPM3P06753 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.64■□□□□ 0.25
TPM3P06753 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TPM3P06753 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM3P06753 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.64■□□□□ 0.25
TPM3P06753 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM3P06753 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TPM3P06753 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.63■□□□□ 0.25
TPM3P06753 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC16.63■□□□□ 0.25
TPM3P06753 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 AC012617.1-204ENST00000586340 2305 ntBASIC16.63■□□□□ 0.25
TPM3P06753 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM3P06753 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM3P06753 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 BEND3P3-201ENST00000611030 2440 ntBASIC16.63■□□□□ 0.25
TPM3P06753 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM3P06753 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM3P06753 RPL37AP1-201ENST00000412502 279 ntBASIC16.63■□□□□ 0.25
TPM3P06753 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms