Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RB1P06400 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.46■□□□□ 0.07
RB1P06400 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RB1P06400 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RB1P06400 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RB1P06400 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RB1P06400 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.07
RB1P06400 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
RB1P06400 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RB1P06400 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
RB1P06400 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.46■□□□□ 0.06
RB1P06400 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RB1P06400 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RB1P06400 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.45■□□□□ 0.06
RB1P06400 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RB1P06400 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.45■□□□□ 0.06
RB1P06400 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RB1P06400 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.45■□□□□ 0.06
RB1P06400 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 AC007326.2-201ENST00000624224 7579 ntBASIC15.45■□□□□ 0.06
RB1P06400 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.45■□□□□ 0.06
RB1P06400 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RB1P06400 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.45■□□□□ 0.06
RB1P06400 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RB1P06400 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 NHP2-202ENST00000314397 599 ntTSL 2 BASIC15.45■□□□□ 0.06
RB1P06400 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.45■□□□□ 0.06
RB1P06400 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.45■□□□□ 0.06
RB1P06400 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.45■□□□□ 0.06
RB1P06400 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.45■□□□□ 0.06
RB1P06400 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC15.45■□□□□ 0.06
RB1P06400 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.45■□□□□ 0.06
RB1P06400 OR5BD1P-201ENST00000532527 817 ntBASIC15.45■□□□□ 0.06
RB1P06400 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RB1P06400 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.45■□□□□ 0.06
RB1P06400 AC007952.4-201ENST00000573866 637 ntBASIC15.45■□□□□ 0.06
RB1P06400 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.45■□□□□ 0.06
RB1P06400 RN7SL665P-201ENST00000578793 300 ntBASIC15.45■□□□□ 0.06
RB1P06400 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.45■□□□□ 0.06
RB1P06400 AC006158.1-201ENST00000610661 249 ntBASIC15.45■□□□□ 0.06
RB1P06400 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 AL451007.2-201ENST00000632004 563 ntBASIC15.45■□□□□ 0.06
RB1P06400 AC002472.4-201ENST00000641915 272 ntBASIC15.45■□□□□ 0.06
RB1P06400 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 LINC01101-201ENST00000622953 1884 ntBASIC15.45■□□□□ 0.06
RB1P06400 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
RB1P06400 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.45■□□□□ 0.06
RB1P06400 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.45■□□□□ 0.06
RB1P06400 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RB1P06400 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.45■□□□□ 0.06
RB1P06400 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RB1P06400 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.45■□□□□ 0.06
RB1P06400 AP002353.1-201ENST00000528257 1599 ntBASIC15.45■□□□□ 0.06
RB1P06400 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.45■□□□□ 0.06
RB1P06400 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RB1P06400 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RB1P06400 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
RB1P06400 AC139712.1-201ENST00000378256 1875 ntBASIC15.44■□□□□ 0.06
RB1P06400 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RB1P06400 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.44■□□□□ 0.06
RB1P06400 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RB1P06400 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 CICP6-201ENST00000457191 2729 ntBASIC15.44■□□□□ 0.06
RB1P06400 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RB1P06400 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RB1P06400 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RB1P06400 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 AGPAT5P1-201ENST00000455855 1019 ntBASIC15.44■□□□□ 0.06
RB1P06400 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.44■□□□□ 0.06
RB1P06400 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.44■□□□□ 0.06
RB1P06400 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RB1P06400 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RB1P06400 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms