Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.8■□□□□ 0.44
APPP05067 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
APPP05067 CHMP1AP1-201ENST00000445563 662 ntBASIC17.8■□□□□ 0.44
APPP05067 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.8■□□□□ 0.44
APPP05067 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.8■□□□□ 0.44
APPP05067 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.8■□□□□ 0.44
APPP05067 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.8■□□□□ 0.44
APPP05067 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.8■□□□□ 0.44
APPP05067 AL136301.1-201ENST00000615830 422 ntBASIC17.8■□□□□ 0.44
APPP05067 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.8■□□□□ 0.44
APPP05067 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APPP05067 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APPP05067 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
APPP05067 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APPP05067 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
APPP05067 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
APPP05067 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.8■□□□□ 0.44
APPP05067 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.8■□□□□ 0.44
APPP05067 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APPP05067 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
APPP05067 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
APPP05067 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
APPP05067 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
APPP05067 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.79■□□□□ 0.44
APPP05067 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 AC015818.8-201ENST00000587907 1519 ntBASIC17.79■□□□□ 0.44
APPP05067 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 CICP4-201ENST00000447359 2812 ntBASIC17.79■□□□□ 0.44
APPP05067 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 MTHFR-210ENST00000641407 2387 ntBASIC17.79■□□□□ 0.44
APPP05067 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.79■□□□□ 0.44
APPP05067 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
APPP05067 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
APPP05067 BTBD6P1-201ENST00000412176 1267 ntBASIC17.79■□□□□ 0.44
APPP05067 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
APPP05067 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 MTX1P1-201ENST00000440904 838 ntBASIC17.79■□□□□ 0.44
APPP05067 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.79■□□□□ 0.44
APPP05067 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.79■□□□□ 0.44
APPP05067 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.79■□□□□ 0.44
APPP05067 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
APPP05067 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.79■□□□□ 0.44
APPP05067 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.79■□□□□ 0.44
APPP05067 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.79■□□□□ 0.44
APPP05067 AL358472.3-201ENST00000608147 415 ntBASIC17.79■□□□□ 0.44
APPP05067 AC091271.1-201ENST00000611877 1162 ntBASIC17.79■□□□□ 0.44
APPP05067 AC244157.2-201ENST00000616239 1006 ntBASIC17.79■□□□□ 0.44
APPP05067 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
APPP05067 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.79■□□□□ 0.44
APPP05067 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 AC007292.2-201ENST00000593524 1812 ntBASIC17.79■□□□□ 0.44
APPP05067 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APPP05067 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.79■□□□□ 0.44
APPP05067 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.79■□□□□ 0.44
APPP05067 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.79■□□□□ 0.44
APPP05067 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.79■□□□□ 0.44
APPP05067 AL136172.1-201ENST00000598590 1394 ntBASIC17.79■□□□□ 0.44
APPP05067 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.78■□□□□ 0.44
APPP05067 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APPP05067 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APPP05067 STK40-201ENST00000359297 4837 ntTSL 2 BASIC17.78■□□□□ 0.44
APPP05067 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
APPP05067 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
APPP05067 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.78■□□□□ 0.44
APPP05067 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
APPP05067 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC17.78■□□□□ 0.44
APPP05067 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APPP05067 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APPP05067 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
APPP05067 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APPP05067 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
APPP05067 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APPP05067 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.78■□□□□ 0.44
APPP05067 MIR1908-201ENST00000410394 80 ntBASIC17.78■□□□□ 0.44
APPP05067 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.78■□□□□ 0.44
APPP05067 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APPP05067 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
APPP05067 GOLGA2P4-201ENST00000441462 777 ntBASIC17.78■□□□□ 0.44
APPP05067 AC100850.1-201ENST00000506768 649 ntBASIC17.78■□□□□ 0.44
APPP05067 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.78■□□□□ 0.44
APPP05067 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.78■□□□□ 0.44
APPP05067 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.78■□□□□ 0.44
APPP05067 AP001002.3-201ENST00000623482 206 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms