Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.66■□□□□ 0.42
CHGBP05060 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHGBP05060 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHGBP05060 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHGBP05060 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHGBP05060 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHGBP05060 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.66■□□□□ 0.42
CHGBP05060 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHGBP05060 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHGBP05060 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.65■□□□□ 0.42
CHGBP05060 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.65■□□□□ 0.42
CHGBP05060 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.65■□□□□ 0.42
CHGBP05060 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CHGBP05060 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CHGBP05060 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHGBP05060 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CHGBP05060 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.65■□□□□ 0.42
CHGBP05060 AC016700.1-201ENST00000429424 312 ntBASIC17.65■□□□□ 0.42
CHGBP05060 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.65■□□□□ 0.42
CHGBP05060 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.65■□□□□ 0.42
CHGBP05060 HLA-J-204ENST00000495278 958 ntBASIC17.65■□□□□ 0.42
CHGBP05060 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.65■□□□□ 0.42
CHGBP05060 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.65■□□□□ 0.42
CHGBP05060 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.65■□□□□ 0.42
CHGBP05060 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.65■□□□□ 0.42
CHGBP05060 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.65■□□□□ 0.42
CHGBP05060 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.65■□□□□ 0.42
CHGBP05060 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHGBP05060 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
CHGBP05060 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CHGBP05060 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.64■□□□□ 0.42
CHGBP05060 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHGBP05060 AC144522.1-201ENST00000625111 1658 ntBASIC17.64■□□□□ 0.42
CHGBP05060 AL009178.2-201ENST00000597278 2719 ntBASIC17.64■□□□□ 0.42
CHGBP05060 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.64■□□□□ 0.41
CHGBP05060 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CHGBP05060 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CHGBP05060 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHGBP05060 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.64■□□□□ 0.41
CHGBP05060 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.64■□□□□ 0.41
CHGBP05060 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.64■□□□□ 0.41
CHGBP05060 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHGBP05060 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.64■□□□□ 0.41
CHGBP05060 AC004898.1-201ENST00000451057 766 ntBASIC17.64■□□□□ 0.41
CHGBP05060 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.64■□□□□ 0.41
CHGBP05060 AC022494.1-201ENST00000466044 728 ntBASIC17.64■□□□□ 0.41
CHGBP05060 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.64■□□□□ 0.41
CHGBP05060 AC006122.1-201ENST00000493323 440 ntBASIC17.64■□□□□ 0.41
CHGBP05060 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.64■□□□□ 0.41
CHGBP05060 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.64■□□□□ 0.41
CHGBP05060 ACTG1P17-201ENST00000558391 1119 ntBASIC17.64■□□□□ 0.41
CHGBP05060 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.64■□□□□ 0.41
CHGBP05060 AC004923.1-202ENST00000642106 209 ntBASIC17.64■□□□□ 0.41
CHGBP05060 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHGBP05060 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.64■□□□□ 0.41
CHGBP05060 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHGBP05060 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHGBP05060 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHGBP05060 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHGBP05060 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHGBP05060 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHGBP05060 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHGBP05060 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.64■□□□□ 0.41
CHGBP05060 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHGBP05060 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CHGBP05060 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHGBP05060 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.64■□□□□ 0.41
CHGBP05060 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHGBP05060 AC015802.1-201ENST00000588104 1449 ntBASIC17.64■□□□□ 0.41
CHGBP05060 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.63■□□□□ 0.41
CHGBP05060 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.63■□□□□ 0.41
CHGBP05060 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.63■□□□□ 0.41
CHGBP05060 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
CHGBP05060 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CHGBP05060 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms