Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
KRT6AP02538 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6AP02538 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6AP02538 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
KRT6AP02538 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
KRT6AP02538 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6AP02538 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
KRT6AP02538 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6AP02538 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6AP02538 CICP20-201ENST00000443330 2801 ntBASIC14.41□□□□□ -0.1
KRT6AP02538 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6AP02538 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6AP02538 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6AP02538 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6AP02538 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6AP02538 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
KRT6AP02538 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
KRT6AP02538 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.4□□□□□ -0.1
KRT6AP02538 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
KRT6AP02538 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.4□□□□□ -0.1
KRT6AP02538 AL031595.1-201ENST00000623969 4709 ntBASIC14.4□□□□□ -0.1
KRT6AP02538 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.4□□□□□ -0.1
KRT6AP02538 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
KRT6AP02538 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
KRT6AP02538 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.4□□□□□ -0.1
KRT6AP02538 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
KRT6AP02538 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
KRT6AP02538 API5-211ENST00000534695 560 ntTSL 5 BASIC14.4□□□□□ -0.1
KRT6AP02538 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.4□□□□□ -0.1
KRT6AP02538 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.4□□□□□ -0.1
KRT6AP02538 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.4□□□□□ -0.1
KRT6AP02538 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.4□□□□□ -0.1
KRT6AP02538 CLUHP6-201ENST00000580789 941 ntBASIC14.4□□□□□ -0.1
KRT6AP02538 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
KRT6AP02538 LINC02560-201ENST00000596379 459 ntBASIC14.4□□□□□ -0.1
KRT6AP02538 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
KRT6AP02538 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.4□□□□□ -0.1
KRT6AP02538 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.4□□□□□ -0.1
KRT6AP02538 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.4□□□□□ -0.1
KRT6AP02538 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.4□□□□□ -0.1
KRT6AP02538 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6AP02538 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.39□□□□□ -0.11
KRT6AP02538 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
KRT6AP02538 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.39□□□□□ -0.11
KRT6AP02538 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
KRT6AP02538 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.39□□□□□ -0.11
KRT6AP02538 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
KRT6AP02538 DMBT1P1-203ENST00000636837 4628 ntBASIC14.39□□□□□ -0.11
KRT6AP02538 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.39□□□□□ -0.11
KRT6AP02538 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
KRT6AP02538 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.39□□□□□ -0.11
KRT6AP02538 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
KRT6AP02538 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
KRT6AP02538 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
KRT6AP02538 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.39□□□□□ -0.11
KRT6AP02538 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
KRT6AP02538 FO681548.1-201ENST00000455617 1132 ntBASIC14.39□□□□□ -0.11
KRT6AP02538 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
KRT6AP02538 AC022137.2-201ENST00000503482 481 ntBASIC14.39□□□□□ -0.11
KRT6AP02538 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.39□□□□□ -0.11
KRT6AP02538 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
KRT6AP02538 AC027796.2-201ENST00000575326 344 ntBASIC14.39□□□□□ -0.11
KRT6AP02538 AC008494.3-201ENST00000606615 944 ntBASIC14.39□□□□□ -0.11
KRT6AP02538 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
KRT6AP02538 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
KRT6AP02538 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.39□□□□□ -0.11
KRT6AP02538 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms