Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-CO1P00395 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.21■□□□□ 0.03
MT-CO1P00395 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.21■□□□□ 0.03
MT-CO1P00395 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.21■□□□□ 0.03
MT-CO1P00395 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.21■□□□□ 0.03
MT-CO1P00395 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-CO1P00395 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-CO1P00395 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.21■□□□□ 0.03
MT-CO1P00395 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.21■□□□□ 0.03
MT-CO1P00395 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-CO1P00395 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
MT-CO1P00395 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
MT-CO1P00395 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.21■□□□□ 0.02
MT-CO1P00395 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MT-CO1P00395 SALL4P5-201ENST00000419001 1760 ntBASIC15.21■□□□□ 0.02
MT-CO1P00395 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
MT-CO1P00395 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MT-CO1P00395 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MT-CO1P00395 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MT-CO1P00395 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-CO1P00395 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
MT-CO1P00395 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-CO1P00395 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.2■□□□□ 0.02
MT-CO1P00395 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.2■□□□□ 0.02
MT-CO1P00395 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-CO1P00395 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-CO1P00395 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
MT-CO1P00395 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-CO1P00395 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 AL136309.1-201ENST00000403917 691 ntBASIC15.2■□□□□ 0.02
MT-CO1P00395 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.2■□□□□ 0.02
MT-CO1P00395 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 AL591846.1-201ENST00000451736 433 ntBASIC15.2■□□□□ 0.02
MT-CO1P00395 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.2■□□□□ 0.02
MT-CO1P00395 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MT-CO1P00395 AL358472.3-201ENST00000608147 415 ntBASIC15.2■□□□□ 0.02
MT-CO1P00395 AL096828.3-201ENST00000615354 462 ntBASIC15.2■□□□□ 0.02
MT-CO1P00395 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.2■□□□□ 0.02
MT-CO1P00395 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.2■□□□□ 0.02
MT-CO1P00395 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
MT-CO1P00395 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-CO1P00395 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-CO1P00395 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-CO1P00395 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-CO1P00395 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-CO1P00395 AC007292.2-201ENST00000593524 1812 ntBASIC15.2■□□□□ 0.02
MT-CO1P00395 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-CO1P00395 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
MT-CO1P00395 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-CO1P00395 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
MT-CO1P00395 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-CO1P00395 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
MT-CO1P00395 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-CO1P00395 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.19■□□□□ 0.02
MT-CO1P00395 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MT-CO1P00395 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-CO1P00395 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.19■□□□□ 0.02
MT-CO1P00395 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.19■□□□□ 0.02
MT-CO1P00395 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms