Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CNOT4O95628 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.23□□□□□ -0.29
CNOT4O95628 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.23□□□□□ -0.29
CNOT4O95628 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.23□□□□□ -0.29
CNOT4O95628 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.23□□□□□ -0.29
CNOT4O95628 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.23□□□□□ -0.29
CNOT4O95628 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.23□□□□□ -0.29
CNOT4O95628 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.23□□□□□ -0.29
CNOT4O95628 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.23□□□□□ -0.29
CNOT4O95628 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CNOT4O95628 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.22□□□□□ -0.29
CNOT4O95628 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.22□□□□□ -0.29
CNOT4O95628 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.22□□□□□ -0.29
CNOT4O95628 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.22□□□□□ -0.29
CNOT4O95628 FKBP4P6-201ENST00000457486 1332 ntBASIC13.22□□□□□ -0.29
CNOT4O95628 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
CNOT4O95628 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.22□□□□□ -0.29
CNOT4O95628 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CNOT4O95628 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.22□□□□□ -0.29
CNOT4O95628 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CNOT4O95628 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.22□□□□□ -0.29
CNOT4O95628 AC079178.1-201ENST00000420915 656 ntBASIC13.22□□□□□ -0.29
CNOT4O95628 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.22□□□□□ -0.29
CNOT4O95628 AC007969.1-201ENST00000433675 447 ntBASIC13.22□□□□□ -0.29
CNOT4O95628 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.22□□□□□ -0.29
CNOT4O95628 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 KRT8P13-201ENST00000463294 1010 ntBASIC13.22□□□□□ -0.29
CNOT4O95628 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.22□□□□□ -0.29
CNOT4O95628 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.22□□□□□ -0.29
CNOT4O95628 EEF1DP1-201ENST00000585891 896 ntBASIC13.22□□□□□ -0.29
CNOT4O95628 OR10B1P-201ENST00000601666 907 ntBASIC13.22□□□□□ -0.29
CNOT4O95628 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.22□□□□□ -0.29
CNOT4O95628 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CNOT4O95628 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
CNOT4O95628 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 PEG13-201ENST00000631594 5667 ntBASIC13.22□□□□□ -0.29
CNOT4O95628 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.22□□□□□ -0.29
CNOT4O95628 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.22□□□□□ -0.29
CNOT4O95628 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.22□□□□□ -0.29
CNOT4O95628 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.22□□□□□ -0.29
CNOT4O95628 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CNOT4O95628 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.22□□□□□ -0.29
CNOT4O95628 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.22□□□□□ -0.29
CNOT4O95628 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.22□□□□□ -0.29
CNOT4O95628 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.21□□□□□ -0.29
CNOT4O95628 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CNOT4O95628 AC145098.2-201ENST00000623593 3026 ntBASIC13.21□□□□□ -0.29
CNOT4O95628 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.21□□□□□ -0.29
CNOT4O95628 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CNOT4O95628 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
CNOT4O95628 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CNOT4O95628 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.21□□□□□ -0.29
CNOT4O95628 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms