Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
POLR1AO95602 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
POLR1AO95602 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1AO95602 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
POLR1AO95602 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC20.9■□□□□ 0.94
POLR1AO95602 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1AO95602 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1AO95602 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1AO95602 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC20.9■□□□□ 0.94
POLR1AO95602 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC20.9■□□□□ 0.94
POLR1AO95602 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1AO95602 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC20.9■□□□□ 0.94
POLR1AO95602 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1AO95602 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1AO95602 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1AO95602 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1AO95602 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1AO95602 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1AO95602 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
POLR1AO95602 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1AO95602 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC20.9■□□□□ 0.94
POLR1AO95602 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC20.9■□□□□ 0.94
POLR1AO95602 OR2A1-AS1-210ENST00000496968 531 ntBASIC20.9■□□□□ 0.94
POLR1AO95602 CHCHD2P2-201ENST00000503744 321 ntBASIC20.9■□□□□ 0.94
POLR1AO95602 AC093826.1-201ENST00000508655 993 ntBASIC20.9■□□□□ 0.94
POLR1AO95602 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC20.9■□□□□ 0.94
POLR1AO95602 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC20.9■□□□□ 0.94
POLR1AO95602 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC20.89■□□□□ 0.94
POLR1AO95602 API5-203ENST00000455725 2257 ntTSL 2 BASIC20.89■□□□□ 0.94
POLR1AO95602 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
POLR1AO95602 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR1AO95602 AC007191.1-201ENST00000623179 2995 ntBASIC20.89■□□□□ 0.93
POLR1AO95602 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
POLR1AO95602 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR1AO95602 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
POLR1AO95602 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
POLR1AO95602 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR1AO95602 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC20.89■□□□□ 0.93
POLR1AO95602 RPL35P9-201ENST00000446059 350 ntBASIC20.89■□□□□ 0.93
POLR1AO95602 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
POLR1AO95602 AC233280.19-201ENST00000633223 136 ntBASIC20.89■□□□□ 0.93
POLR1AO95602 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR1AO95602 AC018529.2-202ENST00000611482 3087 ntBASIC20.89■□□□□ 0.93
POLR1AO95602 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
POLR1AO95602 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC20.89■□□□□ 0.93
POLR1AO95602 GOLGA8DP-202ENST00000341390 2184 ntBASIC20.88■□□□□ 0.93
POLR1AO95602 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1AO95602 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1AO95602 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1AO95602 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1AO95602 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
POLR1AO95602 AL136172.1-201ENST00000598590 1394 ntBASIC20.88■□□□□ 0.93
POLR1AO95602 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1AO95602 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.88■□□□□ 0.93
POLR1AO95602 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.88■□□□□ 0.93
POLR1AO95602 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1AO95602 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1AO95602 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
POLR1AO95602 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.88■□□□□ 0.93
POLR1AO95602 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC20.88■□□□□ 0.93
POLR1AO95602 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC20.88■□□□□ 0.93
POLR1AO95602 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1AO95602 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1AO95602 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1AO95602 TREHP1-201ENST00000531328 465 ntBASIC20.88■□□□□ 0.93
POLR1AO95602 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC20.88■□□□□ 0.93
POLR1AO95602 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1AO95602 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1AO95602 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
POLR1AO95602 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1AO95602 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
POLR1AO95602 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1AO95602 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1AO95602 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
POLR1AO95602 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1AO95602 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1AO95602 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
POLR1AO95602 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
POLR1AO95602 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC20.87■□□□□ 0.93
POLR1AO95602 GEMIN8P4-201ENST00000380526 729 ntBASIC20.87■□□□□ 0.93
POLR1AO95602 AL035414.1-201ENST00000451327 857 ntBASIC20.87■□□□□ 0.93
POLR1AO95602 DUX4L50-201ENST00000455245 715 ntBASIC20.87■□□□□ 0.93
POLR1AO95602 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC20.87■□□□□ 0.93
POLR1AO95602 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC20.87■□□□□ 0.93
POLR1AO95602 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
POLR1AO95602 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC20.87■□□□□ 0.93
POLR1AO95602 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC20.87■□□□□ 0.93
POLR1AO95602 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC20.87■□□□□ 0.93
POLR1AO95602 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC20.87■□□□□ 0.93
POLR1AO95602 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1AO95602 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC20.87■□□□□ 0.93
POLR1AO95602 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.87■□□□□ 0.93
POLR1AO95602 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1AO95602 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
POLR1AO95602 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
POLR1AO95602 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1AO95602 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1AO95602 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1AO95602 AC140479.7-201ENST00000636301 2332 ntBASIC20.87■□□□□ 0.93
POLR1AO95602 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms