Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IDH3BO43837 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
IDH3BO43837 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
IDH3BO43837 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
IDH3BO43837 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
IDH3BO43837 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IDH3BO43837 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.71□□□□□ -0.22
IDH3BO43837 AC019294.4-201ENST00000561777 2905 ntBASIC13.7□□□□□ -0.22
IDH3BO43837 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.7□□□□□ -0.22
IDH3BO43837 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 AC018529.2-202ENST00000611482 3087 ntBASIC13.7□□□□□ -0.22
IDH3BO43837 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.7□□□□□ -0.22
IDH3BO43837 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.7□□□□□ -0.22
IDH3BO43837 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
IDH3BO43837 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.7□□□□□ -0.22
IDH3BO43837 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.7□□□□□ -0.22
IDH3BO43837 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.7□□□□□ -0.22
IDH3BO43837 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
IDH3BO43837 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
IDH3BO43837 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
IDH3BO43837 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.7□□□□□ -0.22
IDH3BO43837 MTHFR-210ENST00000641407 2387 ntBASIC13.7□□□□□ -0.22
IDH3BO43837 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.7□□□□□ -0.22
IDH3BO43837 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.7□□□□□ -0.22
IDH3BO43837 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.7□□□□□ -0.22
IDH3BO43837 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
IDH3BO43837 KRT18P13-201ENST00000400056 1290 ntBASIC13.7□□□□□ -0.22
IDH3BO43837 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.7□□□□□ -0.22
IDH3BO43837 DNAJB3-202ENST00000449667 1266 ntBASIC13.7□□□□□ -0.22
IDH3BO43837 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.7□□□□□ -0.22
IDH3BO43837 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.7□□□□□ -0.22
IDH3BO43837 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
IDH3BO43837 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.7□□□□□ -0.22
IDH3BO43837 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.7□□□□□ -0.22
IDH3BO43837 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
IDH3BO43837 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.7□□□□□ -0.22
IDH3BO43837 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
IDH3BO43837 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
IDH3BO43837 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.7□□□□□ -0.22
IDH3BO43837 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.7□□□□□ -0.22
IDH3BO43837 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IDH3BO43837 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.69□□□□□ -0.22
IDH3BO43837 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.69□□□□□ -0.22
IDH3BO43837 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 MST1P2-201ENST00000457982 2291 ntBASIC13.69□□□□□ -0.22
IDH3BO43837 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.69□□□□□ -0.22
IDH3BO43837 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
IDH3BO43837 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
IDH3BO43837 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
IDH3BO43837 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.69□□□□□ -0.22
IDH3BO43837 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.69□□□□□ -0.22
IDH3BO43837 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.69□□□□□ -0.22
IDH3BO43837 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.69□□□□□ -0.22
IDH3BO43837 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
IDH3BO43837 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.69□□□□□ -0.22
IDH3BO43837 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.69□□□□□ -0.22
IDH3BO43837 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.69□□□□□ -0.22
IDH3BO43837 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.69□□□□□ -0.22
IDH3BO43837 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.69□□□□□ -0.22
IDH3BO43837 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
IDH3BO43837 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
IDH3BO43837 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
IDH3BO43837 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms