Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.92□□□□□ -0.34
XRCC2O43543 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
XRCC2O43543 AC145423.3-201ENST00000615987 467 ntBASIC12.92□□□□□ -0.34
XRCC2O43543 ENPP7P14-201ENST00000621765 1040 ntBASIC12.92□□□□□ -0.34
XRCC2O43543 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
XRCC2O43543 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.92□□□□□ -0.34
XRCC2O43543 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.92□□□□□ -0.34
XRCC2O43543 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.92□□□□□ -0.34
XRCC2O43543 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.92□□□□□ -0.34
XRCC2O43543 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
XRCC2O43543 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.92□□□□□ -0.34
XRCC2O43543 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
XRCC2O43543 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.92□□□□□ -0.34
XRCC2O43543 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
XRCC2O43543 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
XRCC2O43543 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.91□□□□□ -0.34
XRCC2O43543 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
XRCC2O43543 AC006504.5-208ENST00000588784 2401 ntBASIC12.91□□□□□ -0.34
XRCC2O43543 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
XRCC2O43543 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
XRCC2O43543 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.91□□□□□ -0.34
XRCC2O43543 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
XRCC2O43543 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
XRCC2O43543 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
XRCC2O43543 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.91□□□□□ -0.34
XRCC2O43543 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.91□□□□□ -0.34
XRCC2O43543 AC007389.4-201ENST00000454674 793 ntBASIC12.91□□□□□ -0.34
XRCC2O43543 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.91□□□□□ -0.34
XRCC2O43543 MESTP3-201ENST00000503460 968 ntBASIC12.91□□□□□ -0.34
XRCC2O43543 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.91□□□□□ -0.34
XRCC2O43543 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.91□□□□□ -0.34
XRCC2O43543 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.91□□□□□ -0.34
XRCC2O43543 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
XRCC2O43543 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.91□□□□□ -0.34
XRCC2O43543 AC015936.2-201ENST00000593177 259 ntBASIC12.91□□□□□ -0.34
XRCC2O43543 AL358472.5-202ENST00000641448 1267 ntBASIC12.91□□□□□ -0.34
XRCC2O43543 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.91□□□□□ -0.34
XRCC2O43543 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.91□□□□□ -0.34
XRCC2O43543 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
XRCC2O43543 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
XRCC2O43543 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.91□□□□□ -0.34
XRCC2O43543 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.91□□□□□ -0.34
XRCC2O43543 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
XRCC2O43543 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.91□□□□□ -0.34
XRCC2O43543 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
XRCC2O43543 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 MRPL37P1-201ENST00000592451 1337 ntBASIC12.9□□□□□ -0.34
XRCC2O43543 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.9□□□□□ -0.34
XRCC2O43543 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.9□□□□□ -0.34
XRCC2O43543 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.9□□□□□ -0.34
XRCC2O43543 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
XRCC2O43543 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms