Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
MSI1O43347 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.33■□□□□ 0.05
MSI1O43347 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MSI1O43347 AL590440.2-201ENST00000641973 1595 ntBASIC15.33■□□□□ 0.05
MSI1O43347 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
MSI1O43347 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.33■□□□□ 0.04
MSI1O43347 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 AC015688.4-201ENST00000580780 1647 ntBASIC15.33■□□□□ 0.04
MSI1O43347 MYO15B-237ENST00000642007 4893 ntBASIC15.33■□□□□ 0.04
MSI1O43347 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.33■□□□□ 0.04
MSI1O43347 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
MSI1O43347 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.33■□□□□ 0.04
MSI1O43347 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.33■□□□□ 0.04
MSI1O43347 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.33■□□□□ 0.04
MSI1O43347 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.33■□□□□ 0.04
MSI1O43347 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.33■□□□□ 0.04
MSI1O43347 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.33■□□□□ 0.04
MSI1O43347 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MSI1O43347 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 AC008825.2-201ENST00000603374 718 ntBASIC15.33■□□□□ 0.04
MSI1O43347 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
MSI1O43347 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.33■□□□□ 0.04
MSI1O43347 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 KRT8P29-201ENST00000420409 1371 ntBASIC15.33■□□□□ 0.04
MSI1O43347 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MSI1O43347 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
MSI1O43347 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.32■□□□□ 0.04
MSI1O43347 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.32■□□□□ 0.04
MSI1O43347 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
MSI1O43347 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
MSI1O43347 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
MSI1O43347 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.32■□□□□ 0.04
MSI1O43347 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.32■□□□□ 0.04
MSI1O43347 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
MSI1O43347 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
MSI1O43347 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 AC139712.1-201ENST00000378256 1875 ntBASIC15.32■□□□□ 0.04
MSI1O43347 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 MIR1247-201ENST00000408206 136 ntBASIC15.32■□□□□ 0.04
MSI1O43347 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.32■□□□□ 0.04
MSI1O43347 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.32■□□□□ 0.04
MSI1O43347 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.32■□□□□ 0.04
MSI1O43347 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.32■□□□□ 0.04
MSI1O43347 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.32■□□□□ 0.04
MSI1O43347 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.32■□□□□ 0.04
MSI1O43347 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.32■□□□□ 0.04
MSI1O43347 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.32■□□□□ 0.04
MSI1O43347 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
MSI1O43347 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.32■□□□□ 0.04
MSI1O43347 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.32■□□□□ 0.04
MSI1O43347 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.32■□□□□ 0.04
MSI1O43347 AL451050.2-201ENST00000606967 682 ntBASIC15.32■□□□□ 0.04
MSI1O43347 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.32■□□□□ 0.04
MSI1O43347 AC244093.1-201ENST00000610837 814 ntBASIC15.32■□□□□ 0.04
MSI1O43347 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 MIR6720-201ENST00000611664 98 ntBASIC15.32■□□□□ 0.04
MSI1O43347 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.32■□□□□ 0.04
MSI1O43347 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
MSI1O43347 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.32■□□□□ 0.04
MSI1O43347 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MSI1O43347 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.32■□□□□ 0.04
MSI1O43347 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
MSI1O43347 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 KRT8P28-201ENST00000433288 1390 ntBASIC15.32■□□□□ 0.04
MSI1O43347 AC020907.1-201ENST00000616460 1350 ntBASIC15.32■□□□□ 0.04
MSI1O43347 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms