Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
PAX4O43316 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 AC022616.1-201ENST00000518688 554 ntBASIC10.69□□□□□ -0.7
PAX4O43316 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
PAX4O43316 TDH-203ENST00000531764 1110 ntBASIC10.69□□□□□ -0.7
PAX4O43316 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC10.69□□□□□ -0.7
PAX4O43316 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC10.69□□□□□ -0.7
PAX4O43316 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC10.69□□□□□ -0.7
PAX4O43316 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC10.69□□□□□ -0.7
PAX4O43316 KSR1-207ENST00000578981 748 ntTSL 4 BASIC10.69□□□□□ -0.7
PAX4O43316 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 ATF5-205ENST00000600336 682 ntTSL 2 BASIC10.69□□□□□ -0.7
PAX4O43316 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 AC005252.2-201ENST00000624630 1141 ntBASIC10.69□□□□□ -0.7
PAX4O43316 ABBA01031660.1-201ENST00000635219 756 ntBASIC10.69□□□□□ -0.7
PAX4O43316 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
PAX4O43316 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC10.69□□□□□ -0.7
PAX4O43316 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
PAX4O43316 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
PAX4O43316 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 GPI-205ENST00000586425 1799 ntTSL 5 BASIC10.69□□□□□ -0.7
PAX4O43316 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC10.69□□□□□ -0.7
PAX4O43316 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC10.69□□□□□ -0.7
PAX4O43316 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 CICP24-201ENST00000605464 2705 ntBASIC10.69□□□□□ -0.7
PAX4O43316 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC10.69□□□□□ -0.7
PAX4O43316 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PAX4O43316 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
PAX4O43316 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC10.68□□□□□ -0.7
PAX4O43316 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC10.68□□□□□ -0.7
PAX4O43316 AGER-206ENST00000375070 1463 ntTSL 5 BASIC10.68□□□□□ -0.7
PAX4O43316 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC10.68□□□□□ -0.7
PAX4O43316 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
PAX4O43316 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
PAX4O43316 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC10.68□□□□□ -0.7
PAX4O43316 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC10.68□□□□□ -0.7
PAX4O43316 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC10.68□□□□□ -0.7
PAX4O43316 RNU1-114P-201ENST00000365297 166 ntBASIC10.68□□□□□ -0.7
PAX4O43316 CALY-203ENST00000368558 825 ntTSL 5 BASIC10.68□□□□□ -0.7
PAX4O43316 PGGT1BP2-201ENST00000398621 1028 ntBASIC10.68□□□□□ -0.7
PAX4O43316 KLF2P2-201ENST00000416807 1039 ntBASIC10.68□□□□□ -0.7
PAX4O43316 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC10.68□□□□□ -0.7
PAX4O43316 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC10.68□□□□□ -0.7
PAX4O43316 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC10.68□□□□□ -0.7
PAX4O43316 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 TAF8-206ENST00000472818 719 ntTSL 2 BASIC10.68□□□□□ -0.7
PAX4O43316 RPL12P24-201ENST00000474907 486 ntBASIC10.68□□□□□ -0.7
PAX4O43316 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC10.68□□□□□ -0.7
PAX4O43316 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC10.68□□□□□ -0.7
PAX4O43316 AC115989.2-201ENST00000578640 563 ntBASIC10.68□□□□□ -0.7
PAX4O43316 AL355816.2-201ENST00000610049 647 ntBASIC10.68□□□□□ -0.7
PAX4O43316 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 PRSS30P-206ENST00000641773 873 ntBASIC10.68□□□□□ -0.7
PAX4O43316 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
PAX4O43316 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC10.68□□□□□ -0.7
PAX4O43316 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
PAX4O43316 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
PAX4O43316 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
PAX4O43316 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
PAX4O43316 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC10.68□□□□□ -0.7
PAX4O43316 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC10.68□□□□□ -0.7
PAX4O43316 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
PAX4O43316 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC10.68□□□□□ -0.7
PAX4O43316 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
PAX4O43316 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms