Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.04□□□□□ -0.32
NPIPB4C9JG80 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.04□□□□□ -0.32
NPIPB4C9JG80 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 AC023310.1-201ENST00000554836 735 ntBASIC13.04□□□□□ -0.32
NPIPB4C9JG80 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 AC008687.7-202ENST00000637404 953 ntBASIC13.04□□□□□ -0.32
NPIPB4C9JG80 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.04□□□□□ -0.32
NPIPB4C9JG80 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 AC007326.2-201ENST00000624224 7579 ntBASIC13.04□□□□□ -0.32
NPIPB4C9JG80 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 MST1P2-201ENST00000457982 2291 ntBASIC13.04□□□□□ -0.32
NPIPB4C9JG80 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 HSPA8P5-201ENST00000456928 2069 ntBASIC13.03□□□□□ -0.32
NPIPB4C9JG80 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 MIR326-201ENST00000362220 95 ntBASIC13.03□□□□□ -0.32
NPIPB4C9JG80 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 MIR1202-201ENST00000408529 83 ntBASIC13.03□□□□□ -0.32
NPIPB4C9JG80 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.03□□□□□ -0.32
NPIPB4C9JG80 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 AC132192.2-201ENST00000596206 1147 ntBASIC13.03□□□□□ -0.32
NPIPB4C9JG80 AL136301.1-201ENST00000615830 422 ntBASIC13.03□□□□□ -0.32
NPIPB4C9JG80 AL162274.1-201ENST00000617191 1098 ntBASIC13.03□□□□□ -0.32
NPIPB4C9JG80 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 KRT8P4-201ENST00000509735 1454 ntBASIC13.03□□□□□ -0.32
NPIPB4C9JG80 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPB4C9JG80 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms