Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SHISA3A0PJX4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.9□□□□□ -0.35
SHISA3A0PJX4 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SHISA3A0PJX4 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
SHISA3A0PJX4 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 TUBB8P4-201ENST00000511806 1324 ntBASIC12.89□□□□□ -0.35
SHISA3A0PJX4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 MRPL37P1-201ENST00000592451 1337 ntBASIC12.89□□□□□ -0.35
SHISA3A0PJX4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 AC026410.3-201ENST00000514280 936 ntBASIC12.89□□□□□ -0.35
SHISA3A0PJX4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 AC131206.1-201ENST00000538078 1211 ntBASIC12.89□□□□□ -0.35
SHISA3A0PJX4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 AP001059.3-201ENST00000619053 235 ntBASIC12.89□□□□□ -0.35
SHISA3A0PJX4 PRSS30P-206ENST00000641773 873 ntBASIC12.89□□□□□ -0.35
SHISA3A0PJX4 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHISA3A0PJX4 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 MIR1233-2-201ENST00000408138 82 ntBASIC12.88□□□□□ -0.35
SHISA3A0PJX4 MIR1233-1-201ENST00000408722 82 ntBASIC12.88□□□□□ -0.35
SHISA3A0PJX4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 AC092337.1-201ENST00000568699 1129 ntBASIC12.88□□□□□ -0.35
SHISA3A0PJX4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHISA3A0PJX4 PCDHA6-201ENST00000378126 3267 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms