Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 PCDHB18P-202ENST00000526308 3197 ntBASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 AL139094.1-201ENST00000405549 1188 ntBASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 AC004461.1-201ENST00000412461 403 ntBASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 ALG1L5P-201ENST00000482043 771 ntBASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 AC138761.1-201ENST00000584393 385 ntBASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 TEX28P1-201ENST00000613479 1221 ntBASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 TEX28P2-201ENST00000617764 1221 ntBASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 AP000437.1-201ENST00000624057 2085 ntBASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRBV3S1A0A5B6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
TCRBV3S1A0A5B6 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TCRBV3S1A0A5B6 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
TCRBV3S1A0A5B6 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.83□□□□□ -0.19
TCRBV3S1A0A5B6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TCRBV3S1A0A5B6 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TCRBV3S1A0A5B6 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TCRBV3S1A0A5B6 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TCRBV3S1A0A5B6 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms