Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 AC069335.1-201ENST00000489972 472 ntBASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
KCNIP3Q9Y2W7 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 KRT18P64-201ENST00000434946 1219 ntBASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 KRT18P3-201ENST00000451602 1288 ntBASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 AL133215.2-201ENST00000609242 977 ntBASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
KCNIP3Q9Y2W7 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.46□□□□□ -0.42
KCNIP3Q9Y2W7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
KCNIP3Q9Y2W7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
KCNIP3Q9Y2W7 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
KCNIP3Q9Y2W7 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.46□□□□□ -0.42
KCNIP3Q9Y2W7 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
KCNIP3Q9Y2W7 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
KCNIP3Q9Y2W7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.46□□□□□ -0.42
KCNIP3Q9Y2W7 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
KCNIP3Q9Y2W7 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
KCNIP3Q9Y2W7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
KCNIP3Q9Y2W7 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
KCNIP3Q9Y2W7 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
KCNIP3Q9Y2W7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
KCNIP3Q9Y2W7 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
KCNIP3Q9Y2W7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 PPT1-213ENST00000641319 2388 ntBASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms