Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CTSFQ9UBX1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.94□□□□□ -0.18
CTSFQ9UBX1 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CTSFQ9UBX1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CTSFQ9UBX1 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CTSFQ9UBX1 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CTSFQ9UBX1 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.94□□□□□ -0.18
CTSFQ9UBX1 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSFQ9UBX1 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSFQ9UBX1 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CTSFQ9UBX1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CTSFQ9UBX1 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 AC016700.1-201ENST00000429424 312 ntBASIC13.93□□□□□ -0.18
CTSFQ9UBX1 EIF4HP1-201ENST00000453115 687 ntBASIC13.93□□□□□ -0.18
CTSFQ9UBX1 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 AC106794.1-201ENST00000506935 792 ntBASIC13.93□□□□□ -0.18
CTSFQ9UBX1 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.93□□□□□ -0.18
CTSFQ9UBX1 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 AC008825.2-201ENST00000603374 718 ntBASIC13.93□□□□□ -0.18
CTSFQ9UBX1 BX088702.1-201ENST00000610784 235 ntBASIC13.93□□□□□ -0.18
CTSFQ9UBX1 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 MIR600HG-201ENST00000449175 5984 ntBASIC13.93□□□□□ -0.18
CTSFQ9UBX1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSFQ9UBX1 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 DPM3-202ENST00000368399 517 ntBASIC13.92□□□□□ -0.18
CTSFQ9UBX1 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 AC005077.2-201ENST00000449786 690 ntBASIC13.92□□□□□ -0.18
CTSFQ9UBX1 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 AC104073.2-201ENST00000453737 312 ntBASIC13.92□□□□□ -0.18
CTSFQ9UBX1 CICP12-201ENST00000455801 843 ntBASIC13.92□□□□□ -0.18
CTSFQ9UBX1 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 AC013355.1-201ENST00000562625 723 ntBASIC13.92□□□□□ -0.18
CTSFQ9UBX1 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.92□□□□□ -0.18
CTSFQ9UBX1 AC004923.1-202ENST00000642106 209 ntBASIC13.92□□□□□ -0.18
CTSFQ9UBX1 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms