Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 AC007191.1-201ENST00000623179 2995 ntBASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 MBLAC2-202ENST00000514906 1936 ntBASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 AL157407.1-201ENST00000435784 904 ntBASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 AC013355.1-201ENST00000562625 723 ntBASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 AL645939.5-201ENST00000606834 243 ntBASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 AC005912.2-201ENST00000619492 2400 ntBASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 TUBBP5-203ENST00000508529 1334 ntBASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.94■□□□□ 0.46
HMG20BQ9P0W2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 AC092135.3-201ENST00000624151 1846 ntBASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 FAM58BP-201ENST00000439056 645 ntBASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 AL645933.1-201ENST00000440087 609 ntBASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 AC012441.2-201ENST00000444843 739 ntBASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 HLA-J-204ENST00000495278 958 ntBASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 AC005962.1-201ENST00000584100 773 ntBASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 AC090164.2-201ENST00000611487 516 ntBASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.93■□□□□ 0.46
HMG20BQ9P0W2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 AL590440.2-201ENST00000641973 1595 ntBASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms