Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 MRPS18AP1-201ENST00000414458 589 ntBASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 AC007969.1-201ENST00000433675 447 ntBASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 AC093726.1-201ENST00000608064 963 ntBASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 MIR6074-201ENST00000612054 107 ntBASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 PEG13-201ENST00000631594 5667 ntBASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 SLC7A15P-201ENST00000424028 1363 ntBASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 AC124283.3-201ENST00000570869 594 ntBASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 AP005019.2-201ENST00000615104 511 ntBASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 AC016397.2-201ENST00000624848 1985 ntBASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms