Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 AC092552.1-201ENST00000547243 906 ntBASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 DUX4L47-201ENST00000566374 394 ntBASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 AC010319.3-201ENST00000597028 470 ntBASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 AL603764.1-201ENST00000636452 321 ntBASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 KRT8P35-201ENST00000483942 1338 ntBASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 AC015818.8-201ENST00000587907 1519 ntBASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 TLE1P1-201ENST00000422965 589 ntBASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 RN7SL399P-201ENST00000471648 279 ntBASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 SNX29P1-201ENST00000548357 1007 ntBASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 MYADML-201ENST00000474610 2147 ntBASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXP3Q9BZS1 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms