Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RN7SL396P-201ENST00000471086 295 ntBASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 AC090386.2-201ENST00000623010 1039 ntBASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 LINC00554-201ENST00000564841 3011 ntBASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 RN7SL596P-201ENST00000582123 288 ntBASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 MIR4472-1-201ENST00000584349 80 ntBASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 AC002472.4-201ENST00000641915 272 ntBASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.66■□□□□ 0.42
RTFDC1Q9BY42 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 AGAP7P-201ENST00000582299 2062 ntBASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 AGAP14-201ENST00000624701 2060 ntBASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 LINC00528-201ENST00000600723 2160 ntBASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 STK16-203ENST00000409516 895 ntTSL 2 BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 AC073592.2-201ENST00000623062 780 ntBASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 AL451007.2-201ENST00000632004 563 ntBASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 AC006372.4-201ENST00000624122 1543 ntBASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 BRD7P5-201ENST00000299197 1822 ntBASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms