Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
ARID3AQ99856 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ARID3AQ99856 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC17.02■□□□□ 0.31
ARID3AQ99856 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ARID3AQ99856 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC17.02■□□□□ 0.31
ARID3AQ99856 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ARID3AQ99856 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ARID3AQ99856 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
ARID3AQ99856 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ARID3AQ99856 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC17.02■□□□□ 0.31
ARID3AQ99856 MST1P2-201ENST00000457982 2291 ntBASIC17.01■□□□□ 0.31
ARID3AQ99856 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC17.01■□□□□ 0.31
ARID3AQ99856 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC17.01■□□□□ 0.31
ARID3AQ99856 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
ARID3AQ99856 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.01■□□□□ 0.31
ARID3AQ99856 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ARID3AQ99856 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.01■□□□□ 0.31
ARID3AQ99856 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC17.01■□□□□ 0.31
ARID3AQ99856 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC17.01■□□□□ 0.31
ARID3AQ99856 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.01■□□□□ 0.31
ARID3AQ99856 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 FO393414.2-201ENST00000405153 598 ntBASIC17.01■□□□□ 0.31
ARID3AQ99856 AC074338.1-201ENST00000416825 156 ntBASIC17.01■□□□□ 0.31
ARID3AQ99856 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.01■□□□□ 0.31
ARID3AQ99856 AC136604.1-201ENST00000418535 575 ntBASIC17.01■□□□□ 0.31
ARID3AQ99856 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.01■□□□□ 0.31
ARID3AQ99856 TSSK5P-201ENST00000423978 907 ntBASIC17.01■□□□□ 0.31
ARID3AQ99856 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ARID3AQ99856 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.01■□□□□ 0.31
ARID3AQ99856 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.01■□□□□ 0.31
ARID3AQ99856 IGHV3-42-201ENST00000520410 361 ntBASIC17.01■□□□□ 0.31
ARID3AQ99856 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.01■□□□□ 0.31
ARID3AQ99856 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.01■□□□□ 0.31
ARID3AQ99856 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.01■□□□□ 0.31
ARID3AQ99856 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC17.01■□□□□ 0.31
ARID3AQ99856 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC17.01■□□□□ 0.31
ARID3AQ99856 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ARID3AQ99856 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.01■□□□□ 0.31
ARID3AQ99856 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC17.01■□□□□ 0.31
ARID3AQ99856 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ARID3AQ99856 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARID3AQ99856 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
ARID3AQ99856 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARID3AQ99856 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARID3AQ99856 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17■□□□□ 0.31
ARID3AQ99856 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ARID3AQ99856 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
ARID3AQ99856 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC17■□□□□ 0.31
ARID3AQ99856 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARID3AQ99856 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ARID3AQ99856 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC17■□□□□ 0.31
ARID3AQ99856 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARID3AQ99856 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ARID3AQ99856 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17■□□□□ 0.31
ARID3AQ99856 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARID3AQ99856 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARID3AQ99856 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17■□□□□ 0.31
ARID3AQ99856 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
ARID3AQ99856 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17■□□□□ 0.31
ARID3AQ99856 AC055876.3-201ENST00000431496 288 ntBASIC17■□□□□ 0.31
ARID3AQ99856 TARDBPP1-201ENST00000442013 1203 ntBASIC17■□□□□ 0.31
ARID3AQ99856 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17■□□□□ 0.31
ARID3AQ99856 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17■□□□□ 0.31
ARID3AQ99856 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
ARID3AQ99856 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17■□□□□ 0.31
ARID3AQ99856 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17■□□□□ 0.31
ARID3AQ99856 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17■□□□□ 0.31
ARID3AQ99856 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC17■□□□□ 0.31
ARID3AQ99856 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17■□□□□ 0.31
ARID3AQ99856 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17■□□□□ 0.31
ARID3AQ99856 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17■□□□□ 0.31
ARID3AQ99856 MIR3197-201ENST00000582241 73 ntBASIC17■□□□□ 0.31
ARID3AQ99856 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17■□□□□ 0.31
ARID3AQ99856 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17■□□□□ 0.31
ARID3AQ99856 AC138649.4-201ENST00000612222 287 ntBASIC17■□□□□ 0.31
ARID3AQ99856 AL590560.3-201ENST00000623350 461 ntBASIC17■□□□□ 0.31
ARID3AQ99856 DNM1P41-201ENST00000623634 3350 ntBASIC17■□□□□ 0.31
ARID3AQ99856 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms