Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC18.89■□□□□ 0.61
ABCA3Q99758 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
ABCA3Q99758 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC18.89■□□□□ 0.61
ABCA3Q99758 RPL18AP16-201ENST00000424057 531 ntBASIC18.89■□□□□ 0.61
ABCA3Q99758 AC100858.1-201ENST00000514059 1228 ntBASIC18.89■□□□□ 0.61
ABCA3Q99758 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC18.89■□□□□ 0.61
ABCA3Q99758 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA3Q99758 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA3Q99758 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA3Q99758 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ABCA3Q99758 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.89■□□□□ 0.61
ABCA3Q99758 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA3Q99758 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA3Q99758 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA3Q99758 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA3Q99758 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ABCA3Q99758 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.89■□□□□ 0.61
ABCA3Q99758 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA3Q99758 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
ABCA3Q99758 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA3Q99758 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA3Q99758 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA3Q99758 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ABCA3Q99758 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA3Q99758 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC18.89■□□□□ 0.61
ABCA3Q99758 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA3Q99758 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA3Q99758 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA3Q99758 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC18.89■□□□□ 0.61
ABCA3Q99758 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
ABCA3Q99758 FAU-201ENST00000279259 461 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCA3Q99758 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ABCA3Q99758 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC18.88■□□□□ 0.61
ABCA3Q99758 PHF23-213ENST00000613632 850 ntTSL 5 BASIC18.88■□□□□ 0.61
ABCA3Q99758 AC113385.2-201ENST00000614465 762 ntBASIC18.88■□□□□ 0.61
ABCA3Q99758 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ABCA3Q99758 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCA3Q99758 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 AC232323.1-201ENST00000540724 2099 ntBASIC18.88■□□□□ 0.61
ABCA3Q99758 PPT1-215ENST00000641471 2368 ntBASIC18.88■□□□□ 0.61
ABCA3Q99758 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ABCA3Q99758 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ABCA3Q99758 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCA3Q99758 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC18.88■□□□□ 0.61
ABCA3Q99758 RHOQP2-201ENST00000449922 579 ntBASIC18.88■□□□□ 0.61
ABCA3Q99758 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC18.88■□□□□ 0.61
ABCA3Q99758 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCA3Q99758 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC18.88■□□□□ 0.61
ABCA3Q99758 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ABCA3Q99758 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 ACY3-202ENST00000529256 933 ntTSL 3 BASIC18.88■□□□□ 0.61
ABCA3Q99758 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC18.88■□□□□ 0.61
ABCA3Q99758 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCA3Q99758 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCA3Q99758 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCA3Q99758 AL354702.1-201ENST00000442006 1960 ntBASIC18.88■□□□□ 0.61
ABCA3Q99758 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCA3Q99758 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCA3Q99758 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCA3Q99758 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA3Q99758 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.87■□□□□ 0.61
ABCA3Q99758 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ABCA3Q99758 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ABCA3Q99758 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCA3Q99758 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ABCA3Q99758 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCA3Q99758 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC18.87■□□□□ 0.61
ABCA3Q99758 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ABCA3Q99758 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.87■□□□□ 0.61
ABCA3Q99758 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.87■□□□□ 0.61
ABCA3Q99758 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCA3Q99758 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCA3Q99758 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
ABCA3Q99758 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCA3Q99758 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC18.87■□□□□ 0.61
ABCA3Q99758 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
ABCA3Q99758 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms