Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
S1PR3Q99500 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.29□□□□□ -0.44
S1PR3Q99500 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.29□□□□□ -0.44
S1PR3Q99500 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.29□□□□□ -0.44
S1PR3Q99500 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.29□□□□□ -0.44
S1PR3Q99500 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.29□□□□□ -0.44
S1PR3Q99500 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
S1PR3Q99500 STRCP1-201ENST00000509801 5328 ntBASIC12.29□□□□□ -0.44
S1PR3Q99500 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 AC015802.1-201ENST00000588104 1449 ntBASIC12.28□□□□□ -0.44
S1PR3Q99500 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
S1PR3Q99500 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.28□□□□□ -0.44
S1PR3Q99500 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
S1PR3Q99500 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.28□□□□□ -0.44
S1PR3Q99500 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
S1PR3Q99500 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
S1PR3Q99500 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.28□□□□□ -0.44
S1PR3Q99500 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.28□□□□□ -0.44
S1PR3Q99500 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
S1PR3Q99500 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 AP006294.1-201ENST00000415407 339 ntBASIC12.28□□□□□ -0.44
S1PR3Q99500 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.28□□□□□ -0.44
S1PR3Q99500 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.28□□□□□ -0.44
S1PR3Q99500 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.28□□□□□ -0.44
S1PR3Q99500 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.28□□□□□ -0.44
S1PR3Q99500 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.28□□□□□ -0.44
S1PR3Q99500 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.28□□□□□ -0.44
S1PR3Q99500 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.28□□□□□ -0.44
S1PR3Q99500 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
S1PR3Q99500 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
S1PR3Q99500 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.28□□□□□ -0.44
S1PR3Q99500 AP001063.1-201ENST00000568332 529 ntBASIC12.28□□□□□ -0.44
S1PR3Q99500 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
S1PR3Q99500 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.28□□□□□ -0.44
S1PR3Q99500 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
S1PR3Q99500 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
S1PR3Q99500 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
S1PR3Q99500 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
S1PR3Q99500 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.28□□□□□ -0.44
S1PR3Q99500 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
S1PR3Q99500 AP001267.2-201ENST00000532619 2086 ntBASIC12.28□□□□□ -0.44
S1PR3Q99500 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
S1PR3Q99500 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
S1PR3Q99500 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
S1PR3Q99500 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
S1PR3Q99500 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
S1PR3Q99500 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
S1PR3Q99500 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.27□□□□□ -0.44
S1PR3Q99500 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
S1PR3Q99500 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
S1PR3Q99500 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.27□□□□□ -0.44
S1PR3Q99500 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.27□□□□□ -0.44
S1PR3Q99500 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
S1PR3Q99500 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.27□□□□□ -0.44
S1PR3Q99500 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
S1PR3Q99500 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
S1PR3Q99500 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms