Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 AC135983.4-201ENST00000564116 1262 ntBASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 RN7SL455P-201ENST00000580629 282 ntBASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 AC007326.1-201ENST00000604539 458 ntBASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 AC012617.1-204ENST00000586340 2305 ntBASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 PYY2-201ENST00000315776 282 ntBASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 AC130709.1-201ENST00000484779 1212 ntBASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 MIR6842-201ENST00000612539 65 ntBASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 TUBB8P4-201ENST00000511806 1324 ntBASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 HIST2H2BA-201ENST00000412169 381 ntBASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 ERP29P1-201ENST00000442902 706 ntBASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 AC007952.4-201ENST00000573866 637 ntBASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP2Q96SN8 AC117503.4-201ENST00000623229 1418 ntBASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 AC090502.4-201ENST00000551714 1386 ntBASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 RPL3P2-204ENST00000413027 1203 ntBASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 AC009560.1-201ENST00000620208 434 ntBASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP2Q96SN8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms