Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.03■□□□□ 0.48
RPGRQ92834 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPGRQ92834 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPGRQ92834 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPGRQ92834 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPGRQ92834 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPGRQ92834 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.03■□□□□ 0.48
RPGRQ92834 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPGRQ92834 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPGRQ92834 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPGRQ92834 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPGRQ92834 HLA-DMA-203ENST00000395305 777 ntBASIC18.03■□□□□ 0.48
RPGRQ92834 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18.03■□□□□ 0.48
RPGRQ92834 AC092638.2-201ENST00000441105 947 ntBASIC18.03■□□□□ 0.48
RPGRQ92834 LYPLA2P1-203ENST00000447689 696 ntBASIC18.03■□□□□ 0.48
RPGRQ92834 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC18.03■□□□□ 0.48
RPGRQ92834 KRT18P66-201ENST00000452970 1269 ntBASIC18.03■□□□□ 0.48
RPGRQ92834 RN7SL277P-201ENST00000481521 288 ntBASIC18.03■□□□□ 0.48
RPGRQ92834 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPGRQ92834 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC18.03■□□□□ 0.48
RPGRQ92834 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPGRQ92834 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPGRQ92834 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
RPGRQ92834 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPGRQ92834 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPGRQ92834 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPGRQ92834 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPGRQ92834 AC090502.4-201ENST00000551714 1386 ntBASIC18.03■□□□□ 0.48
RPGRQ92834 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RPGRQ92834 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RPGRQ92834 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPGRQ92834 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RPGRQ92834 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RPGRQ92834 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC18.02■□□□□ 0.48
RPGRQ92834 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.02■□□□□ 0.48
RPGRQ92834 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPGRQ92834 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RPGRQ92834 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPGRQ92834 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RPGRQ92834 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RPGRQ92834 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPGRQ92834 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RPGRQ92834 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPGRQ92834 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RPGRQ92834 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RPGRQ92834 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC18.02■□□□□ 0.48
RPGRQ92834 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RPGRQ92834 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPGRQ92834 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC18.02■□□□□ 0.48
RPGRQ92834 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC18.02■□□□□ 0.48
RPGRQ92834 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RPGRQ92834 AL354861.1-201ENST00000445213 355 ntBASIC18.02■□□□□ 0.48
RPGRQ92834 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.02■□□□□ 0.48
RPGRQ92834 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18.02■□□□□ 0.48
RPGRQ92834 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC18.02■□□□□ 0.48
RPGRQ92834 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RPGRQ92834 AC138701.2-201ENST00000553634 226 ntBASIC18.02■□□□□ 0.48
RPGRQ92834 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.02■□□□□ 0.48
RPGRQ92834 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC18.02■□□□□ 0.48
RPGRQ92834 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RPGRQ92834 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RPGRQ92834 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC18.02■□□□□ 0.48
RPGRQ92834 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RPGRQ92834 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPGRQ92834 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RPGRQ92834 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
RPGRQ92834 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RPGRQ92834 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RPGRQ92834 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
RPGRQ92834 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RPGRQ92834 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
RPGRQ92834 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.02■□□□□ 0.47
RPGRQ92834 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RPGRQ92834 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RPGRQ92834 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC18.01■□□□□ 0.47
RPGRQ92834 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC18.01■□□□□ 0.47
RPGRQ92834 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RPGRQ92834 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPGRQ92834 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPGRQ92834 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPGRQ92834 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RPGRQ92834 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RPGRQ92834 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPGRQ92834 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPGRQ92834 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPGRQ92834 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RPGRQ92834 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
RPGRQ92834 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPGRQ92834 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPGRQ92834 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC18.01■□□□□ 0.47
RPGRQ92834 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPGRQ92834 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPGRQ92834 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.01■□□□□ 0.47
RPGRQ92834 ST13P19-201ENST00000442505 1124 ntBASIC18.01■□□□□ 0.47
RPGRQ92834 AC004837.1-201ENST00000446267 564 ntBASIC18.01■□□□□ 0.47
RPGRQ92834 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC18.01■□□□□ 0.47
RPGRQ92834 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RPGRQ92834 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.01■□□□□ 0.47
RPGRQ92834 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
RPGRQ92834 KRT8P1-201ENST00000557533 1207 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms