Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 AL137783.1-201ENST00000623494 1896 ntBASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 HLA-K-203ENST00000430151 1046 ntBASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 GAPDHP40-201ENST00000505218 1006 ntBASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 YBX1P5-201ENST00000509441 847 ntBASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 AC093525.8-201ENST00000624099 1342 ntBASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB3IL1Q8TBN0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 CICP8-201ENST00000455800 2813 ntBASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 AC011840.2-201ENST00000563063 1520 ntBASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 PMS2P2-201ENST00000425039 1128 ntBASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 AP006288.1-201ENST00000446065 395 ntBASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 MIR6074-201ENST00000612054 107 ntBASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 AL513210.1-201ENST00000629608 234 ntBASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IL1Q8TBN0 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms