Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 CICP23-201ENST00000605013 2741 ntBASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 BTBD6P1-201ENST00000412176 1267 ntBASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 AC138696.2-201ENST00000607376 223 ntBASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 AC015818.8-201ENST00000587907 1519 ntBASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 RN7SKP175-201ENST00000408472 289 ntBASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 PFN1P12-201ENST00000455938 534 ntBASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 AC108725.1-201ENST00000495472 409 ntBASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.37□□□□□ -0.27
FNDC9Q8TBE3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 AC009093.2-202ENST00000620513 2079 ntBASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FNDC9Q8TBE3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms