Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 AC041040.2-201ENST00000622926 2899 ntBASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 AC232323.1-201ENST00000540724 2099 ntBASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 TLE1P1-201ENST00000422965 589 ntBASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 VDAC1P1-201ENST00000439229 848 ntBASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 AC134698.3-201ENST00000523880 214 ntBASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 AL161670.2-201ENST00000557650 1227 ntBASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 AF254983.2-201ENST00000612331 135 ntBASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 AL136295.7-201ENST00000619226 1200 ntBASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.52■□□□□ 0.08
SHKBP1Q8TBC3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 AC079781.5-202ENST00000641784 3743 ntBASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.52■□□□□ 0.07
SHKBP1Q8TBC3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 HLA-J-204ENST00000495278 958 ntBASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 MIR3907-201ENST00000579424 151 ntBASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 AC008805.1-201ENST00000590892 364 ntBASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 AL157791.1-201ENST00000553667 1699 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms