Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 AC140912.1-201ENST00000577171 1054 ntBASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 AC099568.2-201ENST00000609194 695 ntBASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 AL023775.1-201ENST00000454907 1746 ntBASIC15.12■□□□□ 0.01
CFAP61Q8NHU2 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 AC134915.1-201ENST00000426461 574 ntBASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 MIR3197-201ENST00000582241 73 ntBASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.11■□□□□ 0.01
CFAP61Q8NHU2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 CICP8-201ENST00000455800 2813 ntBASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 CRB3P1-201ENST00000449338 276 ntBASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 RPL13AP25-201ENST00000484130 612 ntBASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 ELK1P1-201ENST00000485699 580 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms