Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 AC079781.5-202ENST00000641784 3743 ntBASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 AC022137.2-201ENST00000503482 481 ntBASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 TERF1P3-201ENST00000505638 1227 ntBASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 TP53TG3HP-202ENST00000569755 579 ntBASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 CU634019.7-201ENST00000624153 1185 ntBASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 FP236241.2-201ENST00000624906 1185 ntBASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.43
ZNF439Q8NDP4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.33□□□□□ -0.44
ZNF439Q8NDP4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms