Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LTBP4Q8N2S1 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LTBP4Q8N2S1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.55■□□□□ 0.72
LTBP4Q8N2S1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
LTBP4Q8N2S1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LTBP4Q8N2S1 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
LTBP4Q8N2S1 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC19.55■□□□□ 0.72
LTBP4Q8N2S1 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LTBP4Q8N2S1 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 PLAC9P1-203ENST00000440031 223 ntBASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 AL133551.1-201ENST00000610279 1222 ntBASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 AC026120.2-201ENST00000617239 309 ntBASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 KRT8P38-201ENST00000441370 1430 ntBASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LTBP4Q8N2S1 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 KRT18P45-201ENST00000515347 1333 ntBASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LTBP4Q8N2S1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 RNF7-202ENST00000393000 805 ntTSL 2 BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 SERPINB8P1-201ENST00000401898 377 ntBASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 RBMX2P5-201ENST00000424312 969 ntBASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 ATP5G1P7-201ENST00000444398 400 ntBASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 PDPN-208ENST00000509009 571 ntTSL 4 BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 AL353708.1-201ENST00000567904 1257 ntBASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 AC008622.3-201ENST00000621170 600 ntBASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 AC091905.3-201ENST00000624959 234 ntBASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC19.52■□□□□ 0.72
LTBP4Q8N2S1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.52■□□□□ 0.71
LTBP4Q8N2S1 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC19.52■□□□□ 0.71
LTBP4Q8N2S1 AMT-256ENST00000638063 1783 ntTSL 5 BASIC19.52■□□□□ 0.71
LTBP4Q8N2S1 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC19.52■□□□□ 0.71
LTBP4Q8N2S1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.52■□□□□ 0.71
LTBP4Q8N2S1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms