Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 MIR3687-2-201ENST00000577708 61 ntBASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 AL596442.2-201ENST00000610240 980 ntBASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 MIR3687-1-201ENST00000614492 61 ntBASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 AC073592.8-201ENST00000624126 511 ntBASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
NUDCD3Q8IVD9 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 AC087499.5-201ENST00000452760 1342 ntBASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 MEIS3P1-201ENST00000495167 958 ntBASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 AC092337.1-201ENST00000568699 1129 ntBASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 CLK3P2-201ENST00000427566 1453 ntBASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NUDCD3Q8IVD9 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NUDCD3Q8IVD9 AC023794.5-201ENST00000564380 2157 ntBASIC14.75□□□□□ -0.05
NUDCD3Q8IVD9 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms