Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
VRK2Q86Y07 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK2Q86Y07 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VRK2Q86Y07 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VRK2Q86Y07 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VRK2Q86Y07 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK2Q86Y07 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.72□□□□□ -0.21
VRK2Q86Y07 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VRK2Q86Y07 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.72□□□□□ -0.21
VRK2Q86Y07 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK2Q86Y07 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK2Q86Y07 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK2Q86Y07 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
VRK2Q86Y07 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK2Q86Y07 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
VRK2Q86Y07 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VRK2Q86Y07 CICP4-201ENST00000447359 2812 ntBASIC13.72□□□□□ -0.21
VRK2Q86Y07 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.72□□□□□ -0.21
VRK2Q86Y07 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VRK2Q86Y07 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK2Q86Y07 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VRK2Q86Y07 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 RN7SL832P-201ENST00000607781 1756 ntBASIC13.71□□□□□ -0.21
VRK2Q86Y07 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK2Q86Y07 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK2Q86Y07 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK2Q86Y07 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VRK2Q86Y07 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VRK2Q86Y07 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VRK2Q86Y07 ACTG1P3-201ENST00000431775 1114 ntBASIC13.71□□□□□ -0.21
VRK2Q86Y07 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK2Q86Y07 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 MESTP3-201ENST00000503460 968 ntBASIC13.71□□□□□ -0.21
VRK2Q86Y07 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 GCOM2-201ENST00000509133 1104 ntBASIC13.71□□□□□ -0.21
VRK2Q86Y07 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 MIR5189-201ENST00000577370 114 ntBASIC13.71□□□□□ -0.21
VRK2Q86Y07 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 AC010319.3-201ENST00000597028 470 ntBASIC13.71□□□□□ -0.21
VRK2Q86Y07 AC138696.2-201ENST00000607376 223 ntBASIC13.71□□□□□ -0.21
VRK2Q86Y07 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK2Q86Y07 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VRK2Q86Y07 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
VRK2Q86Y07 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VRK2Q86Y07 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
VRK2Q86Y07 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.71□□□□□ -0.22
VRK2Q86Y07 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
VRK2Q86Y07 AC090505.1-201ENST00000430515 1834 ntBASIC13.71□□□□□ -0.22
VRK2Q86Y07 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VRK2Q86Y07 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
VRK2Q86Y07 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
VRK2Q86Y07 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
VRK2Q86Y07 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 AC106760.1-201ENST00000508690 800 ntBASIC13.7□□□□□ -0.22
VRK2Q86Y07 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 AC068587.3-201ENST00000526613 355 ntBASIC13.7□□□□□ -0.22
VRK2Q86Y07 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 PTP4A1P2-201ENST00000546033 454 ntBASIC13.7□□□□□ -0.22
VRK2Q86Y07 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 AC138466.3-201ENST00000619983 221 ntBASIC13.7□□□□□ -0.22
VRK2Q86Y07 ENPP7P14-201ENST00000621765 1040 ntBASIC13.7□□□□□ -0.22
VRK2Q86Y07 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms