Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 OR2I1P-209ENST00000641730 5365 ntBASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 AC023794.5-201ENST00000564380 2157 ntBASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 MIR1909-201ENST00000411312 80 ntBASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 AC112492.5-201ENST00000421897 457 ntBASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 TMEM198B-204ENST00000484016 896 ntBASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 KRT17P8-201ENST00000540749 863 ntBASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 MIR6799-201ENST00000620297 69 ntBASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.55■□□□□ 0.08
FOXR1Q6PIV2 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 PCDHB18P-202ENST00000526308 3197 ntBASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 MYCLP2-201ENST00000449268 967 ntBASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 ACA64.2-201ENST00000459014 129 ntBASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 241.1 ms