Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 AC106820.3-201ENST00000561653 397 ntBASIC17.7■□□□□ 0.42
RNF20Q5VTR2 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 AC027601.5-201ENST00000624065 2482 ntBASIC17.69■□□□□ 0.42
RNF20Q5VTR2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 COX5BP8-201ENST00000416911 349 ntBASIC17.69■□□□□ 0.42
RNF20Q5VTR2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 FTH1P14-201ENST00000482930 551 ntBASIC17.69■□□□□ 0.42
RNF20Q5VTR2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 MIR6074-201ENST00000612054 107 ntBASIC17.69■□□□□ 0.42
RNF20Q5VTR2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 IGHV3-72-202ENST00000621503 303 ntBASIC17.69■□□□□ 0.42
RNF20Q5VTR2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 AC152010.1-201ENST00000415779 2006 ntBASIC17.69■□□□□ 0.42
RNF20Q5VTR2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF20Q5VTR2 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 TMEM14DP-201ENST00000422205 345 ntBASIC17.68■□□□□ 0.42
RNF20Q5VTR2 NME2P1-201ENST00000426182 414 ntBASIC17.68■□□□□ 0.42
RNF20Q5VTR2 KRT43P-201ENST00000434019 910 ntBASIC17.68■□□□□ 0.42
RNF20Q5VTR2 FAM8A4P-201ENST00000435433 1213 ntBASIC17.68■□□□□ 0.42
RNF20Q5VTR2 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms