Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.86□□□□□ -0.51
FAM78BQ5VT40 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
FAM78BQ5VT40 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
FAM78BQ5VT40 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.86□□□□□ -0.51
FAM78BQ5VT40 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
FAM78BQ5VT40 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
FAM78BQ5VT40 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
FAM78BQ5VT40 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.86□□□□□ -0.51
FAM78BQ5VT40 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
FAM78BQ5VT40 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
FAM78BQ5VT40 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
FAM78BQ5VT40 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
FAM78BQ5VT40 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 AL591122.2-201ENST00000624125 1853 ntBASIC11.85□□□□□ -0.51
FAM78BQ5VT40 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.85□□□□□ -0.51
FAM78BQ5VT40 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 AC074338.1-201ENST00000416825 156 ntBASIC11.85□□□□□ -0.51
FAM78BQ5VT40 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 CNN2P11-201ENST00000429351 262 ntBASIC11.85□□□□□ -0.51
FAM78BQ5VT40 MTND6P24-201ENST00000440466 518 ntBASIC11.85□□□□□ -0.51
FAM78BQ5VT40 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 AL596442.2-201ENST00000610240 980 ntBASIC11.85□□□□□ -0.51
FAM78BQ5VT40 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 AC134684.3-201ENST00000641758 218 ntBASIC11.85□□□□□ -0.51
FAM78BQ5VT40 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 AC092053.3-201ENST00000641308 4975 ntBASIC11.85□□□□□ -0.51
FAM78BQ5VT40 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 PCDHA5-203ENST00000614258 4248 ntBASIC11.85□□□□□ -0.51
FAM78BQ5VT40 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
FAM78BQ5VT40 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 AC083964.2-201ENST00000623988 2396 ntBASIC11.84□□□□□ -0.51
FAM78BQ5VT40 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 MEX3B-202ENST00000558133 4333 ntBASIC11.84□□□□□ -0.51
FAM78BQ5VT40 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
FAM78BQ5VT40 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms