Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RIF1Q5UIP0 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
RIF1Q5UIP0 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RIF1Q5UIP0 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RIF1Q5UIP0 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC14.08□□□□□ -0.15
RIF1Q5UIP0 AC008021.1-201ENST00000474180 414 ntBASIC14.08□□□□□ -0.15
RIF1Q5UIP0 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC14.08□□□□□ -0.15
RIF1Q5UIP0 CDC37P2-201ENST00000562287 1029 ntBASIC14.08□□□□□ -0.15
RIF1Q5UIP0 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC14.08□□□□□ -0.15
RIF1Q5UIP0 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC14.08□□□□□ -0.15
RIF1Q5UIP0 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC14.08□□□□□ -0.15
RIF1Q5UIP0 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.08□□□□□ -0.15
RIF1Q5UIP0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RIF1Q5UIP0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RIF1Q5UIP0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RIF1Q5UIP0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 AL359092.2-201ENST00000423330 585 ntBASIC14.08□□□□□ -0.16
RIF1Q5UIP0 RN7SL128P-201ENST00000467883 305 ntBASIC14.08□□□□□ -0.16
RIF1Q5UIP0 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 BMF-206ENST00000558774 671 ntTSL 3 BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 KRT8P34-201ENST00000577607 1044 ntBASIC14.08□□□□□ -0.16
RIF1Q5UIP0 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 AC016582.2-202ENST00000587765 1094 ntBASIC14.08□□□□□ -0.16
RIF1Q5UIP0 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC14.08□□□□□ -0.16
RIF1Q5UIP0 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC14.08□□□□□ -0.16
RIF1Q5UIP0 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 AC245369.7-201ENST00000631386 350 ntBASIC14.08□□□□□ -0.16
RIF1Q5UIP0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 AC023090.2-201ENST00000625182 2110 ntBASIC14.08□□□□□ -0.16
RIF1Q5UIP0 FAM226B-201ENST00000602508 1490 ntBASIC14.08□□□□□ -0.16
RIF1Q5UIP0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RIF1Q5UIP0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 PSAT1P2-201ENST00000426107 972 ntBASIC14.07□□□□□ -0.16
RIF1Q5UIP0 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 AL359091.4-201ENST00000610052 409 ntBASIC14.07□□□□□ -0.16
RIF1Q5UIP0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 SALL4P5-201ENST00000419001 1760 ntBASIC14.07□□□□□ -0.16
RIF1Q5UIP0 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 RPL5P21-201ENST00000404620 815 ntBASIC14.07□□□□□ -0.16
RIF1Q5UIP0 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 TREX1-203ENST00000456089 629 ntTSL 3 BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 RN7SL33P-201ENST00000462543 342 ntBASIC14.07□□□□□ -0.16
RIF1Q5UIP0 MST1L-204ENST00000545160 559 ntTSL 4 BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.07□□□□□ -0.16
RIF1Q5UIP0 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms