Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC006529.1-201ENST00000459978 637 ntBASIC18.23■□□□□ 0.51
RC3H1Q5TC82 RN7SL582P-201ENST00000491078 279 ntBASIC18.23■□□□□ 0.51
RC3H1Q5TC82 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 GAS7-216ENST00000583882 553 ntTSL 5 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 PEBP1P2-201ENST00000603980 558 ntBASIC18.23■□□□□ 0.51
RC3H1Q5TC82 AC006548.2-201ENST00000605217 529 ntBASIC18.23■□□□□ 0.51
RC3H1Q5TC82 AC006483.2-201ENST00000609813 515 ntBASIC18.23■□□□□ 0.51
RC3H1Q5TC82 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 NME4-203ENST00000397722 1232 ntTSL 2 BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 BX679664.3-201ENST00000414070 555 ntBASIC18.22■□□□□ 0.51
RC3H1Q5TC82 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 AC113935.1-201ENST00000471722 555 ntBASIC18.22■□□□□ 0.51
RC3H1Q5TC82 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 KRT8P2-201ENST00000556193 944 ntBASIC18.22■□□□□ 0.51
RC3H1Q5TC82 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 AP005212.2-201ENST00000584979 510 ntBASIC18.22■□□□□ 0.51
RC3H1Q5TC82 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RC3H1Q5TC82 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 AL161932.2-201ENST00000435436 679 ntBASIC18.21■□□□□ 0.51
RC3H1Q5TC82 AC244197.1-201ENST00000456494 951 ntBASIC18.21■□□□□ 0.51
RC3H1Q5TC82 RN7SL788P-201ENST00000460504 316 ntBASIC18.21■□□□□ 0.51
RC3H1Q5TC82 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 USB1-205ENST00000561743 1135 ntTSL 3 BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 AC145285.5-201ENST00000562217 361 ntBASIC18.21■□□□□ 0.51
RC3H1Q5TC82 AP005264.6-204ENST00000588436 719 ntBASIC18.21■□□□□ 0.51
RC3H1Q5TC82 CYP4F36P-201ENST00000589193 186 ntBASIC18.21■□□□□ 0.51
RC3H1Q5TC82 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RC3H1Q5TC82 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RC3H1Q5TC82 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
RC3H1Q5TC82 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.21■□□□□ 0.5
RC3H1Q5TC82 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RC3H1Q5TC82 AC084018.2-201ENST00000613093 2607 ntBASIC18.2■□□□□ 0.5
RC3H1Q5TC82 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
RC3H1Q5TC82 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RC3H1Q5TC82 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.2■□□□□ 0.5
RC3H1Q5TC82 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
RC3H1Q5TC82 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.2■□□□□ 0.5
RC3H1Q5TC82 MSANTD2P1-201ENST00000445341 1368 ntBASIC18.2■□□□□ 0.5
RC3H1Q5TC82 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RC3H1Q5TC82 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RC3H1Q5TC82 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RC3H1Q5TC82 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms