Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 AL009178.2-201ENST00000597278 2719 ntBASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HERC4Q5GLZ8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.58■□□□□ 0.25
HERC4Q5GLZ8 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.25
HERC4Q5GLZ8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.58■□□□□ 0.25
HERC4Q5GLZ8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
HERC4Q5GLZ8 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.58■□□□□ 0.25
HERC4Q5GLZ8 AC097359.2-201ENST00000604992 2389 ntBASIC16.58■□□□□ 0.25
HERC4Q5GLZ8 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HERC4Q5GLZ8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HERC4Q5GLZ8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.58■□□□□ 0.25
HERC4Q5GLZ8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HERC4Q5GLZ8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 FTH1P14-201ENST00000482930 551 ntBASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 MESTP3-201ENST00000503460 968 ntBASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 FAM86HP-204ENST00000513466 959 ntBASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 MIR4722-201ENST00000578292 60 ntBASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 AC244452.3-201ENST00000636814 210 ntBASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 AL138725.1-201ENST00000407347 1314 ntBASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.58■□□□□ 0.24
HERC4Q5GLZ8 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
HERC4Q5GLZ8 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HERC4Q5GLZ8 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HERC4Q5GLZ8 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HERC4Q5GLZ8 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.57■□□□□ 0.24
HERC4Q5GLZ8 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HERC4Q5GLZ8 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.57■□□□□ 0.24
HERC4Q5GLZ8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.57■□□□□ 0.24
HERC4Q5GLZ8 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HERC4Q5GLZ8 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.57■□□□□ 0.24
HERC4Q5GLZ8 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms