Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC6LQ2NKX8 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC6LQ2NKX8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC6LQ2NKX8 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.74■□□□□ 0.11
ERCC6LQ2NKX8 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC6LQ2NKX8 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC6LQ2NKX8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC6LQ2NKX8 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC6LQ2NKX8 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC15.74■□□□□ 0.11
ERCC6LQ2NKX8 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 RNA5SP415-201ENST00000517246 115 ntBASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 KRT8P14-201ENST00000414254 1442 ntBASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC6LQ2NKX8 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 AC005014.1-201ENST00000432006 2976 ntBASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 MIR346-201ENST00000362234 95 ntBASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 IGHV3-22-201ENST00000520721 359 ntBASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ERCC6LQ2NKX8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms