Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
COL16A1Q07092 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL16A1Q07092 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL16A1Q07092 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC19.14■□□□□ 0.65
COL16A1Q07092 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC19.14■□□□□ 0.65
COL16A1Q07092 CDC37P2-201ENST00000562287 1029 ntBASIC19.14■□□□□ 0.65
COL16A1Q07092 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC19.14■□□□□ 0.65
COL16A1Q07092 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC19.14■□□□□ 0.65
COL16A1Q07092 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL16A1Q07092 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL16A1Q07092 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC19.14■□□□□ 0.65
COL16A1Q07092 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL16A1Q07092 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
COL16A1Q07092 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL16A1Q07092 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.13■□□□□ 0.65
COL16A1Q07092 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL16A1Q07092 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL16A1Q07092 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
COL16A1Q07092 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL16A1Q07092 AP005117.1-202ENST00000581724 1908 ntBASIC19.13■□□□□ 0.65
COL16A1Q07092 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL16A1Q07092 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
COL16A1Q07092 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL16A1Q07092 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC19.13■□□□□ 0.65
COL16A1Q07092 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
COL16A1Q07092 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL16A1Q07092 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC19.13■□□□□ 0.65
COL16A1Q07092 AC123912.6-201ENST00000612657 315 ntBASIC19.13■□□□□ 0.65
COL16A1Q07092 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL16A1Q07092 AP003680.1-201ENST00000598970 3660 ntBASIC19.13■□□□□ 0.65
COL16A1Q07092 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL16A1Q07092 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.13■□□□□ 0.65
COL16A1Q07092 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL16A1Q07092 LINC00115-201ENST00000473798 1317 ntBASIC19.12■□□□□ 0.65
COL16A1Q07092 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.12■□□□□ 0.65
COL16A1Q07092 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC19.12■□□□□ 0.65
COL16A1Q07092 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL16A1Q07092 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.12■□□□□ 0.65
COL16A1Q07092 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC19.12■□□□□ 0.65
COL16A1Q07092 RPL10-203ENST00000406022 748 ntTSL 3 BASIC19.12■□□□□ 0.65
COL16A1Q07092 CCND3P1-201ENST00000438347 580 ntBASIC19.12■□□□□ 0.65
COL16A1Q07092 RPL29P2-201ENST00000488409 460 ntBASIC19.12■□□□□ 0.65
COL16A1Q07092 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC19.12■□□□□ 0.65
COL16A1Q07092 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC19.12■□□□□ 0.65
COL16A1Q07092 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC19.12■□□□□ 0.65
COL16A1Q07092 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC19.12■□□□□ 0.65
COL16A1Q07092 RPS5-205ENST00000598495 800 ntTSL 3 BASIC19.12■□□□□ 0.65
COL16A1Q07092 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC19.12■□□□□ 0.65
COL16A1Q07092 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL16A1Q07092 AL121753.2-201ENST00000624581 1461 ntBASIC19.12■□□□□ 0.65
COL16A1Q07092 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL16A1Q07092 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL16A1Q07092 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL16A1Q07092 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
COL16A1Q07092 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC19.12■□□□□ 0.65
COL16A1Q07092 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL16A1Q07092 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL16A1Q07092 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL16A1Q07092 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL16A1Q07092 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC19.11■□□□□ 0.65
COL16A1Q07092 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC19.11■□□□□ 0.65
COL16A1Q07092 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.11■□□□□ 0.65
COL16A1Q07092 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
COL16A1Q07092 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL16A1Q07092 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL16A1Q07092 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL16A1Q07092 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
COL16A1Q07092 DNM1P46-202ENST00000415963 882 ntBASIC19.11■□□□□ 0.65
COL16A1Q07092 PGK1P2-201ENST00000431702 1214 ntBASIC19.11■□□□□ 0.65
COL16A1Q07092 RBPMSLP-201ENST00000433427 502 ntBASIC19.11■□□□□ 0.65
COL16A1Q07092 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC19.11■□□□□ 0.65
COL16A1Q07092 GULOP-201ENST00000454030 748 ntBASIC19.11■□□□□ 0.65
COL16A1Q07092 CETN3-205ENST00000522842 664 ntTSL 2 BASIC19.11■□□□□ 0.65
COL16A1Q07092 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC19.11■□□□□ 0.65
COL16A1Q07092 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC19.11■□□□□ 0.65
COL16A1Q07092 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC19.11■□□□□ 0.65
COL16A1Q07092 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL16A1Q07092 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL16A1Q07092 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
COL16A1Q07092 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
COL16A1Q07092 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC19.11■□□□□ 0.65
COL16A1Q07092 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC19.11■□□□□ 0.65
COL16A1Q07092 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
COL16A1Q07092 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
COL16A1Q07092 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
COL16A1Q07092 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL16A1Q07092 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
COL16A1Q07092 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL16A1Q07092 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL16A1Q07092 SARS-202ENST00000369923 1882 ntTSL 5 BASIC19.11■□□□□ 0.65
COL16A1Q07092 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.11■□□□□ 0.65
COL16A1Q07092 SALL4P6-201ENST00000429385 1691 ntBASIC19.11■□□□□ 0.65
COL16A1Q07092 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL16A1Q07092 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL16A1Q07092 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
COL16A1Q07092 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
COL16A1Q07092 AL161932.2-201ENST00000435436 679 ntBASIC19.11■□□□□ 0.65
COL16A1Q07092 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC19.11■□□□□ 0.65
COL16A1Q07092 AC233724.9-201ENST00000511694 407 ntBASIC19.11■□□□□ 0.65
COL16A1Q07092 CCND3P2-201ENST00000579393 537 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms