Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 AL033527.5-202ENST00000641632 1098 ntBASIC14.11□□□□□ -0.15
CHRNB3Q05901 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 AC105206.1-202ENST00000314927 2368 ntBASIC14.11□□□□□ -0.15
CHRNB3Q05901 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 CICP20-201ENST00000443330 2801 ntBASIC14.1□□□□□ -0.15
CHRNB3Q05901 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 AL158211.3-201ENST00000607385 239 ntBASIC14.1□□□□□ -0.15
CHRNB3Q05901 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRNB3Q05901 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CHRNB3Q05901 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRNB3Q05901 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.09□□□□□ -0.15
CHRNB3Q05901 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CHRNB3Q05901 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CHRNB3Q05901 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRNB3Q05901 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CHRNB3Q05901 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRNB3Q05901 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.09□□□□□ -0.15
CHRNB3Q05901 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRNB3Q05901 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRNB3Q05901 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CHRNB3Q05901 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRNB3Q05901 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRNB3Q05901 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CHRNB3Q05901 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRNB3Q05901 PPT1-213ENST00000641319 2388 ntBASIC14.09□□□□□ -0.15
CHRNB3Q05901 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CHRNB3Q05901 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRNB3Q05901 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CHRNB3Q05901 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.09□□□□□ -0.15
CHRNB3Q05901 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.09□□□□□ -0.15
CHRNB3Q05901 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.09□□□□□ -0.15
CHRNB3Q05901 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.09□□□□□ -0.15
CHRNB3Q05901 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHRNB3Q05901 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms