Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.77□□□□□ -0.21
HOXC5Q00444 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HOXC5Q00444 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.77□□□□□ -0.21
HOXC5Q00444 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC5Q00444 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC5Q00444 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC5Q00444 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC5Q00444 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC5Q00444 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC5Q00444 AC087499.6-201ENST00000411576 835 ntBASIC13.77□□□□□ -0.21
HOXC5Q00444 AC152010.1-201ENST00000415779 2006 ntBASIC13.77□□□□□ -0.21
HOXC5Q00444 AC002472.2-201ENST00000442739 958 ntBASIC13.77□□□□□ -0.21
HOXC5Q00444 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC5Q00444 AL391825.1-201ENST00000457671 1364 ntBASIC13.77□□□□□ -0.21
HOXC5Q00444 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC5Q00444 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC5Q00444 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HOXC5Q00444 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC5Q00444 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.77□□□□□ -0.21
HOXC5Q00444 AC089987.1-201ENST00000551654 2209 ntBASIC13.77□□□□□ -0.21
HOXC5Q00444 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.77□□□□□ -0.21
HOXC5Q00444 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.77□□□□□ -0.21
HOXC5Q00444 CLUHP6-201ENST00000580789 941 ntBASIC13.77□□□□□ -0.21
HOXC5Q00444 AC012617.1-204ENST00000586340 2305 ntBASIC13.77□□□□□ -0.21
HOXC5Q00444 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.77□□□□□ -0.21
HOXC5Q00444 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
HOXC5Q00444 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.77□□□□□ -0.21
HOXC5Q00444 WFDC1-204ENST00000613603 549 ntBASIC13.77□□□□□ -0.21
HOXC5Q00444 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.77□□□□□ -0.21
HOXC5Q00444 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.77□□□□□ -0.21
HOXC5Q00444 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
HOXC5Q00444 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
HOXC5Q00444 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HOXC5Q00444 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC5Q00444 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HOXC5Q00444 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.77□□□□□ -0.21
HOXC5Q00444 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC5Q00444 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.77□□□□□ -0.21
HOXC5Q00444 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
HOXC5Q00444 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
HOXC5Q00444 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.77□□□□□ -0.21
HOXC5Q00444 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.77□□□□□ -0.21
HOXC5Q00444 AC027612.1-201ENST00000445234 2395 ntBASIC13.76□□□□□ -0.21
HOXC5Q00444 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
HOXC5Q00444 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
HOXC5Q00444 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.76□□□□□ -0.21
HOXC5Q00444 MSTO2P-201ENST00000314835 1709 ntBASIC13.76□□□□□ -0.21
HOXC5Q00444 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HOXC5Q00444 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HOXC5Q00444 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.76□□□□□ -0.21
HOXC5Q00444 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
HOXC5Q00444 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.76□□□□□ -0.21
HOXC5Q00444 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HOXC5Q00444 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HOXC5Q00444 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
HOXC5Q00444 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.76□□□□□ -0.21
HOXC5Q00444 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.76□□□□□ -0.21
HOXC5Q00444 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 TPT1P11-201ENST00000458482 498 ntBASIC13.76□□□□□ -0.21
HOXC5Q00444 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.76□□□□□ -0.21
HOXC5Q00444 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.76□□□□□ -0.21
HOXC5Q00444 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.76□□□□□ -0.21
HOXC5Q00444 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.76□□□□□ -0.21
HOXC5Q00444 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
HOXC5Q00444 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.76□□□□□ -0.21
HOXC5Q00444 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.76□□□□□ -0.21
HOXC5Q00444 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.76□□□□□ -0.21
HOXC5Q00444 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.76□□□□□ -0.21
HOXC5Q00444 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.76□□□□□ -0.21
HOXC5Q00444 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.76□□□□□ -0.21
HOXC5Q00444 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
HOXC5Q00444 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.76□□□□□ -0.21
HOXC5Q00444 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.76□□□□□ -0.21
HOXC5Q00444 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.76□□□□□ -0.21
HOXC5Q00444 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HOXC5Q00444 AGGF1P1-201ENST00000509500 2073 ntBASIC13.76□□□□□ -0.21
HOXC5Q00444 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HOXC5Q00444 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.76□□□□□ -0.21
HOXC5Q00444 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC5Q00444 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.76□□□□□ -0.21
HOXC5Q00444 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms