Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX3P78415 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.31■□□□□ 0.36
IRX3P78415 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.3■□□□□ 0.36
IRX3P78415 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IRX3P78415 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IRX3P78415 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.3■□□□□ 0.36
IRX3P78415 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IRX3P78415 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
IRX3P78415 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.3■□□□□ 0.36
IRX3P78415 AC006480.2-201ENST00000609770 1337 ntBASIC17.3■□□□□ 0.36
IRX3P78415 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.3■□□□□ 0.36
IRX3P78415 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
IRX3P78415 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX3P78415 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
IRX3P78415 ISCA2P1-201ENST00000425548 448 ntBASIC17.3■□□□□ 0.36
IRX3P78415 AC253536.4-201ENST00000440539 267 ntBASIC17.3■□□□□ 0.36
IRX3P78415 AC012441.2-201ENST00000444843 739 ntBASIC17.3■□□□□ 0.36
IRX3P78415 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.3■□□□□ 0.36
IRX3P78415 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.3■□□□□ 0.36
IRX3P78415 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.3■□□□□ 0.36
IRX3P78415 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.3■□□□□ 0.36
IRX3P78415 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX3P78415 AC132192.2-201ENST00000596206 1147 ntBASIC17.3■□□□□ 0.36
IRX3P78415 AL132994.2-201ENST00000603120 687 ntBASIC17.3■□□□□ 0.36
IRX3P78415 AC012044.1-201ENST00000603431 297 ntBASIC17.3■□□□□ 0.36
IRX3P78415 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
IRX3P78415 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX3P78415 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.3■□□□□ 0.36
IRX3P78415 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.3■□□□□ 0.36
IRX3P78415 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX3P78415 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX3P78415 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX3P78415 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX3P78415 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX3P78415 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
IRX3P78415 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX3P78415 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.3■□□□□ 0.36
IRX3P78415 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
IRX3P78415 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX3P78415 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IRX3P78415 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IRX3P78415 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.29■□□□□ 0.36
IRX3P78415 AC118758.2-201ENST00000614242 2813 ntBASIC17.29■□□□□ 0.36
IRX3P78415 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.29■□□□□ 0.36
IRX3P78415 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
IRX3P78415 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.29■□□□□ 0.36
IRX3P78415 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
IRX3P78415 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.29■□□□□ 0.36
IRX3P78415 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.29■□□□□ 0.36
IRX3P78415 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
IRX3P78415 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.29■□□□□ 0.36
IRX3P78415 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.29■□□□□ 0.36
IRX3P78415 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.29■□□□□ 0.36
IRX3P78415 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.29■□□□□ 0.36
IRX3P78415 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.29■□□□□ 0.36
IRX3P78415 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.29■□□□□ 0.36
IRX3P78415 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.29■□□□□ 0.36
IRX3P78415 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.29■□□□□ 0.36
IRX3P78415 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
IRX3P78415 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.29■□□□□ 0.36
IRX3P78415 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.29■□□□□ 0.36
IRX3P78415 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
IRX3P78415 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.29■□□□□ 0.36
IRX3P78415 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
IRX3P78415 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX3P78415 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.29■□□□□ 0.36
IRX3P78415 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IRX3P78415 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IRX3P78415 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
IRX3P78415 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IRX3P78415 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IRX3P78415 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IRX3P78415 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.28■□□□□ 0.36
IRX3P78415 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.28■□□□□ 0.36
IRX3P78415 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
IRX3P78415 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IRX3P78415 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IRX3P78415 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IRX3P78415 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IRX3P78415 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IRX3P78415 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IRX3P78415 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms